Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RC3H1Q5TC82 PPY2P-201ENST00000582808 702 ntBASIC19.62■□□□□ 0.73
RC3H1Q5TC82 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RC3H1Q5TC82 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RC3H1Q5TC82 AC092171.3-201ENST00000610122 2651 ntBASIC19.62■□□□□ 0.73
RC3H1Q5TC82 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RC3H1Q5TC82 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RC3H1Q5TC82 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RC3H1Q5TC82 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RC3H1Q5TC82 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC19.62■□□□□ 0.73
RC3H1Q5TC82 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RC3H1Q5TC82 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.61■□□□□ 0.73
RC3H1Q5TC82 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
RC3H1Q5TC82 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RC3H1Q5TC82 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RC3H1Q5TC82 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC19.61■□□□□ 0.73
RC3H1Q5TC82 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RC3H1Q5TC82 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RC3H1Q5TC82 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RC3H1Q5TC82 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC19.61■□□□□ 0.73
RC3H1Q5TC82 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RC3H1Q5TC82 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RC3H1Q5TC82 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RC3H1Q5TC82 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RC3H1Q5TC82 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
RC3H1Q5TC82 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RC3H1Q5TC82 NDUFAB1P1-201ENST00000404262 460 ntBASIC19.61■□□□□ 0.73
RC3H1Q5TC82 POM121L8P-201ENST00000417732 1281 ntBASIC19.61■□□□□ 0.73
RC3H1Q5TC82 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RC3H1Q5TC82 RGS5-214ENST00000429865 754 ntTSL 3 BASIC19.61■□□□□ 0.73
RC3H1Q5TC82 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RC3H1Q5TC82 POM121L9P-203ENST00000441984 1285 ntBASIC19.61■□□□□ 0.73
RC3H1Q5TC82 RN7SL720P-201ENST00000488178 304 ntBASIC19.61■□□□□ 0.73
RC3H1Q5TC82 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC19.61■□□□□ 0.73
RC3H1Q5TC82 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC19.61■□□□□ 0.73
RC3H1Q5TC82 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC19.61■□□□□ 0.73
RC3H1Q5TC82 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RC3H1Q5TC82 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC19.61■□□□□ 0.73
RC3H1Q5TC82 ZACNP1-201ENST00000612259 710 ntBASIC19.61■□□□□ 0.73
RC3H1Q5TC82 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
RC3H1Q5TC82 CU633904.3-201ENST00000624042 1029 ntBASIC19.61■□□□□ 0.73
RC3H1Q5TC82 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC19.61■□□□□ 0.73
RC3H1Q5TC82 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RC3H1Q5TC82 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RC3H1Q5TC82 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RC3H1Q5TC82 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RC3H1Q5TC82 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RC3H1Q5TC82 AMT-224ENST00000635808 1610 ntTSL 5 BASIC19.61■□□□□ 0.73
RC3H1Q5TC82 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RC3H1Q5TC82 AC007787.1-201ENST00000588095 1583 ntBASIC19.61■□□□□ 0.73
RC3H1Q5TC82 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RC3H1Q5TC82 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RC3H1Q5TC82 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RC3H1Q5TC82 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RC3H1Q5TC82 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RC3H1Q5TC82 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RC3H1Q5TC82 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RC3H1Q5TC82 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.6■□□□□ 0.73
RC3H1Q5TC82 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RC3H1Q5TC82 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.6■□□□□ 0.73
RC3H1Q5TC82 SPTLC1P5-201ENST00000450718 252 ntBASIC19.6■□□□□ 0.73
RC3H1Q5TC82 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RC3H1Q5TC82 TMEM198B-204ENST00000484016 896 ntBASIC19.6■□□□□ 0.73
RC3H1Q5TC82 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RC3H1Q5TC82 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC19.6■□□□□ 0.73
RC3H1Q5TC82 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
RC3H1Q5TC82 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC19.6■□□□□ 0.73
RC3H1Q5TC82 AC073413.1-201ENST00000603927 732 ntBASIC19.6■□□□□ 0.73
RC3H1Q5TC82 AP001505.2-201ENST00000616815 443 ntBASIC19.6■□□□□ 0.73
RC3H1Q5TC82 MIR6727-201ENST00000620702 65 ntBASIC19.6■□□□□ 0.73
RC3H1Q5TC82 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC19.6■□□□□ 0.73
RC3H1Q5TC82 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RC3H1Q5TC82 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RC3H1Q5TC82 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.6■□□□□ 0.73
RC3H1Q5TC82 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.6■□□□□ 0.73
RC3H1Q5TC82 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RC3H1Q5TC82 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RC3H1Q5TC82 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RC3H1Q5TC82 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.6■□□□□ 0.73
RC3H1Q5TC82 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RC3H1Q5TC82 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.6■□□□□ 0.73
RC3H1Q5TC82 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RC3H1Q5TC82 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC19.6■□□□□ 0.73
RC3H1Q5TC82 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RC3H1Q5TC82 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RC3H1Q5TC82 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RC3H1Q5TC82 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.59■□□□□ 0.73
RC3H1Q5TC82 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RC3H1Q5TC82 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RC3H1Q5TC82 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RC3H1Q5TC82 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RC3H1Q5TC82 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC19.59■□□□□ 0.73
RC3H1Q5TC82 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
RC3H1Q5TC82 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC19.59■□□□□ 0.73
RC3H1Q5TC82 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RC3H1Q5TC82 CHMP1AP1-201ENST00000445563 662 ntBASIC19.59■□□□□ 0.73
RC3H1Q5TC82 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RC3H1Q5TC82 AC004066.1-201ENST00000502488 802 ntBASIC19.59■□□□□ 0.73
RC3H1Q5TC82 AC245884.6-201ENST00000515672 1067 ntBASIC19.59■□□□□ 0.73
RC3H1Q5TC82 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms