Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 CFTRP2-201ENST00000634304 199 ntBASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
RNFT1Q5M7Z0 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
RNFT1Q5M7Z0 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RNFT1Q5M7Z0 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.21□□□□□ -0.13
RNFT1Q5M7Z0 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNFT1Q5M7Z0 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNFT1Q5M7Z0 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
RNFT1Q5M7Z0 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RNFT1Q5M7Z0 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNFT1Q5M7Z0 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
RNFT1Q5M7Z0 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
RNFT1Q5M7Z0 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.21□□□□□ -0.13
RNFT1Q5M7Z0 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.21□□□□□ -0.13
RNFT1Q5M7Z0 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNFT1Q5M7Z0 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNFT1Q5M7Z0 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNFT1Q5M7Z0 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
RNFT1Q5M7Z0 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNFT1Q5M7Z0 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNFT1Q5M7Z0 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNFT1Q5M7Z0 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.21□□□□□ -0.13
RNFT1Q5M7Z0 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.21□□□□□ -0.13
RNFT1Q5M7Z0 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RNFT1Q5M7Z0 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.21□□□□□ -0.13
RNFT1Q5M7Z0 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.21□□□□□ -0.13
RNFT1Q5M7Z0 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.21□□□□□ -0.13
RNFT1Q5M7Z0 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNFT1Q5M7Z0 ENPP7P5-201ENST00000541031 1031 ntBASIC14.21□□□□□ -0.13
RNFT1Q5M7Z0 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.21□□□□□ -0.13
RNFT1Q5M7Z0 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.21□□□□□ -0.13
RNFT1Q5M7Z0 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.21□□□□□ -0.13
RNFT1Q5M7Z0 MIR4313-201ENST00000580760 101 ntBASIC14.21□□□□□ -0.13
RNFT1Q5M7Z0 CLUHP6-201ENST00000580789 941 ntBASIC14.21□□□□□ -0.13
RNFT1Q5M7Z0 AC000095.1-201ENST00000603208 874 ntBASIC14.21□□□□□ -0.13
RNFT1Q5M7Z0 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.21□□□□□ -0.13
RNFT1Q5M7Z0 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNFT1Q5M7Z0 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RNFT1Q5M7Z0 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNFT1Q5M7Z0 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNFT1Q5M7Z0 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
RNFT1Q5M7Z0 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RNFT1Q5M7Z0 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.21□□□□□ -0.14
RNFT1Q5M7Z0 MSTO2P-201ENST00000314835 1709 ntBASIC14.21□□□□□ -0.14
RNFT1Q5M7Z0 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
RNFT1Q5M7Z0 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.21□□□□□ -0.14
RNFT1Q5M7Z0 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.21□□□□□ -0.14
RNFT1Q5M7Z0 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.21□□□□□ -0.14
RNFT1Q5M7Z0 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RNFT1Q5M7Z0 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNFT1Q5M7Z0 PDIA3P1-201ENST00000471856 1510 ntBASIC14.2□□□□□ -0.14
RNFT1Q5M7Z0 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
RNFT1Q5M7Z0 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNFT1Q5M7Z0 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.2□□□□□ -0.14
RNFT1Q5M7Z0 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.2□□□□□ -0.14
RNFT1Q5M7Z0 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.2□□□□□ -0.14
RNFT1Q5M7Z0 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNFT1Q5M7Z0 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNFT1Q5M7Z0 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNFT1Q5M7Z0 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.2□□□□□ -0.14
RNFT1Q5M7Z0 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.2□□□□□ -0.14
RNFT1Q5M7Z0 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.2□□□□□ -0.14
RNFT1Q5M7Z0 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.2□□□□□ -0.14
RNFT1Q5M7Z0 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.2□□□□□ -0.14
RNFT1Q5M7Z0 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNFT1Q5M7Z0 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNFT1Q5M7Z0 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNFT1Q5M7Z0 C1QBPP1-201ENST00000400117 770 ntBASIC14.2□□□□□ -0.14
RNFT1Q5M7Z0 SOCS2P1-201ENST00000417727 557 ntBASIC14.2□□□□□ -0.14
RNFT1Q5M7Z0 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNFT1Q5M7Z0 BCRP2-202ENST00000447763 634 ntBASIC14.2□□□□□ -0.14
RNFT1Q5M7Z0 KRT223P-202ENST00000449164 1292 ntBASIC14.2□□□□□ -0.14
RNFT1Q5M7Z0 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.2□□□□□ -0.14
RNFT1Q5M7Z0 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.2□□□□□ -0.14
RNFT1Q5M7Z0 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms