Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.66■□□□□ 0.26
PTPN20Q4JDL3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN20Q4JDL3 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN20Q4JDL3 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN20Q4JDL3 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
PTPN20Q4JDL3 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN20Q4JDL3 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN20Q4JDL3 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN20Q4JDL3 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN20Q4JDL3 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN20Q4JDL3 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.65■□□□□ 0.26
PTPN20Q4JDL3 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN20Q4JDL3 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN20Q4JDL3 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
PTPN20Q4JDL3 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN20Q4JDL3 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN20Q4JDL3 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN20Q4JDL3 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PTPN20Q4JDL3 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.65■□□□□ 0.26
PTPN20Q4JDL3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN20Q4JDL3 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN20Q4JDL3 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN20Q4JDL3 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN20Q4JDL3 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN20Q4JDL3 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN20Q4JDL3 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN20Q4JDL3 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN20Q4JDL3 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.65■□□□□ 0.26
PTPN20Q4JDL3 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.65■□□□□ 0.26
PTPN20Q4JDL3 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.65■□□□□ 0.26
PTPN20Q4JDL3 AC055876.3-201ENST00000431496 288 ntBASIC16.65■□□□□ 0.26
PTPN20Q4JDL3 KRT18P64-201ENST00000434946 1219 ntBASIC16.65■□□□□ 0.26
PTPN20Q4JDL3 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.65■□□□□ 0.26
PTPN20Q4JDL3 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.65■□□□□ 0.26
PTPN20Q4JDL3 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.65■□□□□ 0.26
PTPN20Q4JDL3 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.65■□□□□ 0.26
PTPN20Q4JDL3 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.65■□□□□ 0.26
PTPN20Q4JDL3 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.65■□□□□ 0.26
PTPN20Q4JDL3 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.65■□□□□ 0.26
PTPN20Q4JDL3 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.65■□□□□ 0.26
PTPN20Q4JDL3 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.65■□□□□ 0.26
PTPN20Q4JDL3 AC138649.4-201ENST00000612222 287 ntBASIC16.65■□□□□ 0.26
PTPN20Q4JDL3 AL109936.8-201ENST00000641772 604 ntBASIC16.65■□□□□ 0.26
PTPN20Q4JDL3 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.65■□□□□ 0.26
PTPN20Q4JDL3 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PTPN20Q4JDL3 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN20Q4JDL3 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN20Q4JDL3 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.65■□□□□ 0.26
PTPN20Q4JDL3 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PTPN20Q4JDL3 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PTPN20Q4JDL3 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN20Q4JDL3 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
PTPN20Q4JDL3 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
PTPN20Q4JDL3 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 AC241585.1-201ENST00000433527 519 ntBASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 AC044860.1-202ENST00000559481 777 ntBASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 LINC01115-203ENST00000606068 577 ntBASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 AC087481.3-201ENST00000602886 1894 ntBASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 AC126177.1-201ENST00000547829 2218 ntBASIC16.64■□□□□ 0.25
PTPN20Q4JDL3 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN20Q4JDL3 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms