Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 USP32P1-208ENST00000506594 1164 ntBASIC19■□□□□ 0.63
RFX7Q2KHR2 AC092552.1-201ENST00000547243 906 ntBASIC19■□□□□ 0.63
RFX7Q2KHR2 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RFX7Q2KHR2 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
RFX7Q2KHR2 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
RFX7Q2KHR2 ORC6-206ENST00000568364 888 ntTSL 5 BASIC19■□□□□ 0.63
RFX7Q2KHR2 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC19■□□□□ 0.63
RFX7Q2KHR2 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC19■□□□□ 0.63
RFX7Q2KHR2 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC19■□□□□ 0.63
RFX7Q2KHR2 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC19■□□□□ 0.63
RFX7Q2KHR2 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC19■□□□□ 0.63
RFX7Q2KHR2 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC19■□□□□ 0.63
RFX7Q2KHR2 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
RFX7Q2KHR2 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC19■□□□□ 0.63
RFX7Q2KHR2 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RFX7Q2KHR2 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFX7Q2KHR2 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
RFX7Q2KHR2 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.99■□□□□ 0.63
RFX7Q2KHR2 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.99■□□□□ 0.63
RFX7Q2KHR2 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFX7Q2KHR2 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFX7Q2KHR2 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC18.99■□□□□ 0.63
RFX7Q2KHR2 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFX7Q2KHR2 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFX7Q2KHR2 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RFX7Q2KHR2 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFX7Q2KHR2 AL133267.1-201ENST00000398220 340 ntBASIC18.99■□□□□ 0.63
RFX7Q2KHR2 KRT18P43-201ENST00000469825 1281 ntBASIC18.99■□□□□ 0.63
RFX7Q2KHR2 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.99■□□□□ 0.63
RFX7Q2KHR2 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.99■□□□□ 0.63
RFX7Q2KHR2 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RFX7Q2KHR2 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC18.99■□□□□ 0.63
RFX7Q2KHR2 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
RFX7Q2KHR2 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.99■□□□□ 0.63
RFX7Q2KHR2 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RFX7Q2KHR2 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFX7Q2KHR2 AC009090.5-201ENST00000624886 2285 ntBASIC18.99■□□□□ 0.63
RFX7Q2KHR2 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
RFX7Q2KHR2 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFX7Q2KHR2 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RFX7Q2KHR2 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RFX7Q2KHR2 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFX7Q2KHR2 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFX7Q2KHR2 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC18.99■□□□□ 0.63
RFX7Q2KHR2 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFX7Q2KHR2 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFX7Q2KHR2 AC022532.1-201ENST00000624563 1728 ntBASIC18.98■□□□□ 0.63
RFX7Q2KHR2 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFX7Q2KHR2 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RFX7Q2KHR2 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.98■□□□□ 0.63
RFX7Q2KHR2 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RFX7Q2KHR2 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RFX7Q2KHR2 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.98■□□□□ 0.63
RFX7Q2KHR2 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFX7Q2KHR2 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFX7Q2KHR2 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFX7Q2KHR2 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFX7Q2KHR2 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFX7Q2KHR2 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFX7Q2KHR2 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.98■□□□□ 0.63
RFX7Q2KHR2 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFX7Q2KHR2 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFX7Q2KHR2 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.98■□□□□ 0.63
RFX7Q2KHR2 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFX7Q2KHR2 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RFX7Q2KHR2 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.98■□□□□ 0.63
RFX7Q2KHR2 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.98■□□□□ 0.63
RFX7Q2KHR2 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.98■□□□□ 0.63
RFX7Q2KHR2 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.98■□□□□ 0.63
RFX7Q2KHR2 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFX7Q2KHR2 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.98■□□□□ 0.63
RFX7Q2KHR2 KRT17P8-201ENST00000540749 863 ntBASIC18.98■□□□□ 0.63
RFX7Q2KHR2 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.98■□□□□ 0.63
RFX7Q2KHR2 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.98■□□□□ 0.63
RFX7Q2KHR2 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFX7Q2KHR2 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFX7Q2KHR2 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFX7Q2KHR2 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFX7Q2KHR2 CLK3P2-201ENST00000427566 1453 ntBASIC18.98■□□□□ 0.63
RFX7Q2KHR2 STK33-217ENST00000534493 1895 ntTSL 2 BASIC18.98■□□□□ 0.63
RFX7Q2KHR2 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC18.98■□□□□ 0.63
RFX7Q2KHR2 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFX7Q2KHR2 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
RFX7Q2KHR2 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.98■□□□□ 0.63
RFX7Q2KHR2 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.98■□□□□ 0.63
RFX7Q2KHR2 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFX7Q2KHR2 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFX7Q2KHR2 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC18.98■□□□□ 0.63
RFX7Q2KHR2 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFX7Q2KHR2 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.98■□□□□ 0.63
RFX7Q2KHR2 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFX7Q2KHR2 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.97■□□□□ 0.63
RFX7Q2KHR2 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RFX7Q2KHR2 AC092127.1-201ENST00000567093 3455 ntBASIC18.97■□□□□ 0.63
RFX7Q2KHR2 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.97■□□□□ 0.63
RFX7Q2KHR2 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC18.97■□□□□ 0.63
RFX7Q2KHR2 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.97■□□□□ 0.63
RFX7Q2KHR2 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.97■□□□□ 0.63
RFX7Q2KHR2 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.97■□□□□ 0.63
RFX7Q2KHR2 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms