Protein–RNA interactions for Protein: Q12770

SCAP, Sterol regulatory element-binding protein cleavage-activating protein, humanhuman

Predictions only

Length 1,279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPQ12770 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.31■□□□□ 0.2
SCAPQ12770 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.31■□□□□ 0.2
SCAPQ12770 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.31■□□□□ 0.2
SCAPQ12770 GPR53P-205ENST00000457298 1084 ntBASIC16.31■□□□□ 0.2
SCAPQ12770 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCAPQ12770 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.31■□□□□ 0.2
SCAPQ12770 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.31■□□□□ 0.2
SCAPQ12770 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.31■□□□□ 0.2
SCAPQ12770 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.31■□□□□ 0.2
SCAPQ12770 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
SCAPQ12770 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.31■□□□□ 0.2
SCAPQ12770 AL606495.2-201ENST00000605867 535 ntBASIC16.31■□□□□ 0.2
SCAPQ12770 AC008738.7-201ENST00000609744 511 ntBASIC16.31■□□□□ 0.2
SCAPQ12770 AC009118.2-201ENST00000613275 655 ntBASIC16.31■□□□□ 0.2
SCAPQ12770 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCAPQ12770 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCAPQ12770 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.31■□□□□ 0.2
SCAPQ12770 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCAPQ12770 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCAPQ12770 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SCAPQ12770 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCAPQ12770 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.31■□□□□ 0.2
SCAPQ12770 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.31■□□□□ 0.2
SCAPQ12770 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.31■□□□□ 0.2
SCAPQ12770 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SCAPQ12770 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SCAPQ12770 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.3■□□□□ 0.2
SCAPQ12770 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.3■□□□□ 0.2
SCAPQ12770 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SCAPQ12770 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.3■□□□□ 0.2
SCAPQ12770 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCAPQ12770 AC132872.4-202ENST00000622924 2756 ntBASIC16.3■□□□□ 0.2
SCAPQ12770 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SCAPQ12770 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SCAPQ12770 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.3■□□□□ 0.2
SCAPQ12770 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SCAPQ12770 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SCAPQ12770 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.3■□□□□ 0.2
SCAPQ12770 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SCAPQ12770 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SCAPQ12770 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
SCAPQ12770 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
SCAPQ12770 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCAPQ12770 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCAPQ12770 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SCAPQ12770 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SCAPQ12770 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
SCAPQ12770 KRT18P64-201ENST00000434946 1219 ntBASIC16.3■□□□□ 0.2
SCAPQ12770 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.3■□□□□ 0.2
SCAPQ12770 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.3■□□□□ 0.2
SCAPQ12770 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.3■□□□□ 0.2
SCAPQ12770 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.3■□□□□ 0.2
SCAPQ12770 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.3■□□□□ 0.2
SCAPQ12770 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.3■□□□□ 0.2
SCAPQ12770 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.3■□□□□ 0.2
SCAPQ12770 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.3■□□□□ 0.2
SCAPQ12770 AC004461.2-201ENST00000629517 803 ntBASIC16.3■□□□□ 0.2
SCAPQ12770 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.3■□□□□ 0.2
SCAPQ12770 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCAPQ12770 TMBIM7P-203ENST00000641617 1718 ntBASIC16.3■□□□□ 0.2
SCAPQ12770 AC009090.5-201ENST00000624886 2285 ntBASIC16.3■□□□□ 0.2
SCAPQ12770 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCAPQ12770 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SCAPQ12770 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCAPQ12770 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SCAPQ12770 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCAPQ12770 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SCAPQ12770 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAPQ12770 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.29■□□□□ 0.2
SCAPQ12770 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.29■□□□□ 0.2
SCAPQ12770 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAPQ12770 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.29■□□□□ 0.2
SCAPQ12770 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAPQ12770 CU639417.3-201ENST00000624240 1404 ntBASIC16.29■□□□□ 0.2
SCAPQ12770 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAPQ12770 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAPQ12770 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.29■□□□□ 0.2
SCAPQ12770 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAPQ12770 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAPQ12770 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.29■□□□□ 0.2
SCAPQ12770 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.29■□□□□ 0.2
SCAPQ12770 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.29■□□□□ 0.2
SCAPQ12770 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAPQ12770 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.29■□□□□ 0.2
SCAPQ12770 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAPQ12770 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SCAPQ12770 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.29■□□□□ 0.2
SCAPQ12770 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.29■□□□□ 0.2
SCAPQ12770 U91328.1-201ENST00000437528 223 ntBASIC16.29■□□□□ 0.2
SCAPQ12770 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.29■□□□□ 0.2
SCAPQ12770 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.29■□□□□ 0.2
SCAPQ12770 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.29■□□□□ 0.2
SCAPQ12770 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SCAPQ12770 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.29■□□□□ 0.2
SCAPQ12770 AC004233.3-201ENST00000607794 1269 ntBASIC16.29■□□□□ 0.2
SCAPQ12770 AC004840.1-201ENST00000636359 365 ntBASIC16.29■□□□□ 0.2
SCAPQ12770 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAPQ12770 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SCAPQ12770 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SCAPQ12770 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms