Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.42■□□□□ 0.38
UBXN1Q04323 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.42■□□□□ 0.38
UBXN1Q04323 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UBXN1Q04323 AC008267.7-201ENST00000624570 1194 ntBASIC17.42■□□□□ 0.38
UBXN1Q04323 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.42■□□□□ 0.38
UBXN1Q04323 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBXN1Q04323 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UBXN1Q04323 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
UBXN1Q04323 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBXN1Q04323 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBXN1Q04323 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UBXN1Q04323 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBXN1Q04323 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.42■□□□□ 0.38
UBXN1Q04323 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.42■□□□□ 0.38
UBXN1Q04323 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBXN1Q04323 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC17.42■□□□□ 0.38
UBXN1Q04323 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
UBXN1Q04323 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBXN1Q04323 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC17.42■□□□□ 0.38
UBXN1Q04323 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.41■□□□□ 0.38
UBXN1Q04323 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
UBXN1Q04323 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBXN1Q04323 AL136982.4-201ENST00000437689 1740 ntBASIC17.41■□□□□ 0.38
UBXN1Q04323 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBXN1Q04323 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBXN1Q04323 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBXN1Q04323 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBXN1Q04323 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBXN1Q04323 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBXN1Q04323 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBXN1Q04323 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBXN1Q04323 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBXN1Q04323 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBXN1Q04323 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBXN1Q04323 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
UBXN1Q04323 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBXN1Q04323 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.41■□□□□ 0.38
UBXN1Q04323 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBXN1Q04323 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBXN1Q04323 TFAMP1-201ENST00000412727 736 ntBASIC17.41■□□□□ 0.38
UBXN1Q04323 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.41■□□□□ 0.38
UBXN1Q04323 AL671277.1-201ENST00000429656 993 ntBASIC17.41■□□□□ 0.38
UBXN1Q04323 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.41■□□□□ 0.38
UBXN1Q04323 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.41■□□□□ 0.38
UBXN1Q04323 RNA5SP416-201ENST00000516838 111 ntBASIC17.41■□□□□ 0.38
UBXN1Q04323 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.41■□□□□ 0.38
UBXN1Q04323 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBXN1Q04323 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.41■□□□□ 0.38
UBXN1Q04323 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.41■□□□□ 0.38
UBXN1Q04323 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.41■□□□□ 0.38
UBXN1Q04323 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.41■□□□□ 0.38
UBXN1Q04323 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBXN1Q04323 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBXN1Q04323 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBXN1Q04323 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBXN1Q04323 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBXN1Q04323 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBXN1Q04323 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBXN1Q04323 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBXN1Q04323 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBXN1Q04323 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBXN1Q04323 ZNF259P1-201ENST00000407656 1365 ntBASIC17.4■□□□□ 0.38
UBXN1Q04323 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.4■□□□□ 0.38
UBXN1Q04323 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBXN1Q04323 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBXN1Q04323 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
UBXN1Q04323 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
UBXN1Q04323 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.4■□□□□ 0.38
UBXN1Q04323 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
UBXN1Q04323 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
UBXN1Q04323 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBXN1Q04323 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17.4■□□□□ 0.38
UBXN1Q04323 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UBXN1Q04323 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
UBXN1Q04323 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.4■□□□□ 0.38
UBXN1Q04323 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.4■□□□□ 0.38
UBXN1Q04323 AL355306.1-201ENST00000415580 579 ntBASIC17.4■□□□□ 0.38
UBXN1Q04323 AC142381.1-201ENST00000426099 345 ntBASIC17.4■□□□□ 0.38
UBXN1Q04323 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.4■□□□□ 0.38
UBXN1Q04323 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.4■□□□□ 0.38
UBXN1Q04323 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.4■□□□□ 0.38
UBXN1Q04323 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.4■□□□□ 0.38
UBXN1Q04323 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.4■□□□□ 0.38
UBXN1Q04323 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBXN1Q04323 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBXN1Q04323 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
UBXN1Q04323 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.4■□□□□ 0.38
UBXN1Q04323 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.4■□□□□ 0.38
UBXN1Q04323 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.4■□□□□ 0.38
UBXN1Q04323 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.4■□□□□ 0.38
UBXN1Q04323 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBXN1Q04323 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBXN1Q04323 AL136379.1-201ENST00000623471 2642 ntBASIC17.39■□□□□ 0.37
UBXN1Q04323 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBXN1Q04323 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBXN1Q04323 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.39■□□□□ 0.37
UBXN1Q04323 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.39■□□□□ 0.37
UBXN1Q04323 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.39■□□□□ 0.37
UBXN1Q04323 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.39■□□□□ 0.37
UBXN1Q04323 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms