Protein–RNA interactions for Protein: P79483

HLA-DRB3, HLA class II histocompatibility antigen, DR beta 3 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB3P79483 PCDHA3-202ENST00000532566 4594 ntBASIC13.34□□□□□ -0.27
HLA-DRB3P79483 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
HLA-DRB3P79483 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
HLA-DRB3P79483 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.33□□□□□ -0.27
HLA-DRB3P79483 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
HLA-DRB3P79483 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
HLA-DRB3P79483 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
HLA-DRB3P79483 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.27
HLA-DRB3P79483 AC092127.1-201ENST00000567093 3455 ntBASIC13.33□□□□□ -0.27
HLA-DRB3P79483 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
HLA-DRB3P79483 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.33□□□□□ -0.28
HLA-DRB3P79483 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB3P79483 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC13.32□□□□□ -0.28
HLA-DRB3P79483 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB3P79483 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.32□□□□□ -0.28
HLA-DRB3P79483 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.32□□□□□ -0.28
HLA-DRB3P79483 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-DRB3P79483 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
HLA-DRB3P79483 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB3P79483 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB3P79483 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.32□□□□□ -0.28
HLA-DRB3P79483 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB3P79483 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
HLA-DRB3P79483 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
HLA-DRB3P79483 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
HLA-DRB3P79483 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
HLA-DRB3P79483 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB3P79483 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-DRB3P79483 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-DRB3P79483 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB3P79483 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB3P79483 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB3P79483 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB3P79483 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
HLA-DRB3P79483 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB3P79483 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.32□□□□□ -0.28
HLA-DRB3P79483 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-DRB3P79483 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.32□□□□□ -0.28
HLA-DRB3P79483 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.32□□□□□ -0.28
HLA-DRB3P79483 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-DRB3P79483 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.32□□□□□ -0.28
HLA-DRB3P79483 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.32□□□□□ -0.28
HLA-DRB3P79483 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC13.32□□□□□ -0.28
HLA-DRB3P79483 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.32□□□□□ -0.28
HLA-DRB3P79483 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC13.32□□□□□ -0.28
HLA-DRB3P79483 AL138918.1-201ENST00000568306 659 ntBASIC13.32□□□□□ -0.28
HLA-DRB3P79483 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.32□□□□□ -0.28
HLA-DRB3P79483 AL513190.1-201ENST00000621254 727 ntBASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms