Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.88■□□□□ 0.45
CCNA1P78396 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCNA1P78396 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCNA1P78396 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCNA1P78396 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.88■□□□□ 0.45
CCNA1P78396 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CCNA1P78396 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCNA1P78396 AC011477.6-201ENST00000604980 1927 ntBASIC17.88■□□□□ 0.45
CCNA1P78396 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CCNA1P78396 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCNA1P78396 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
CCNA1P78396 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCNA1P78396 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CCNA1P78396 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCNA1P78396 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCNA1P78396 MIR326-201ENST00000362220 95 ntBASIC17.88■□□□□ 0.45
CCNA1P78396 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCNA1P78396 GOLGA2P4-201ENST00000441462 777 ntBASIC17.88■□□□□ 0.45
CCNA1P78396 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.88■□□□□ 0.45
CCNA1P78396 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.88■□□□□ 0.45
CCNA1P78396 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.88■□□□□ 0.45
CCNA1P78396 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.88■□□□□ 0.45
CCNA1P78396 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.88■□□□□ 0.45
CCNA1P78396 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.88■□□□□ 0.45
CCNA1P78396 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.88■□□□□ 0.45
CCNA1P78396 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.88■□□□□ 0.45
CCNA1P78396 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCNA1P78396 AHCYP2-201ENST00000430630 1300 ntBASIC17.88■□□□□ 0.45
CCNA1P78396 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCNA1P78396 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCNA1P78396 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCNA1P78396 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCNA1P78396 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCNA1P78396 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.88■□□□□ 0.45
CCNA1P78396 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CCNA1P78396 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCNA1P78396 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCNA1P78396 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCNA1P78396 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCNA1P78396 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.87■□□□□ 0.45
CCNA1P78396 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCNA1P78396 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCNA1P78396 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCNA1P78396 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCNA1P78396 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCNA1P78396 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCNA1P78396 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCNA1P78396 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCNA1P78396 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCNA1P78396 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCNA1P78396 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCNA1P78396 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCNA1P78396 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCNA1P78396 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.87■□□□□ 0.45
CCNA1P78396 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.87■□□□□ 0.45
CCNA1P78396 FAM197Y7-201ENST00000432892 766 ntBASIC17.87■□□□□ 0.45
CCNA1P78396 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.87■□□□□ 0.45
CCNA1P78396 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCNA1P78396 AP001258.2-201ENST00000529891 490 ntBASIC17.87■□□□□ 0.45
CCNA1P78396 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.87■□□□□ 0.45
CCNA1P78396 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.87■□□□□ 0.45
CCNA1P78396 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.87■□□□□ 0.45
CCNA1P78396 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.87■□□□□ 0.45
CCNA1P78396 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.87■□□□□ 0.45
CCNA1P78396 AC145423.3-201ENST00000615987 467 ntBASIC17.87■□□□□ 0.45
CCNA1P78396 BX539320.1-201ENST00000623759 877 ntBASIC17.87■□□□□ 0.45
CCNA1P78396 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CCNA1P78396 KRT8P35-201ENST00000483942 1338 ntBASIC17.87■□□□□ 0.45
CCNA1P78396 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCNA1P78396 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.87■□□□□ 0.45
CCNA1P78396 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.87■□□□□ 0.45
CCNA1P78396 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCNA1P78396 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCNA1P78396 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
CCNA1P78396 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CCNA1P78396 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CCNA1P78396 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCNA1P78396 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCNA1P78396 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCNA1P78396 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCNA1P78396 AL138799.1-201ENST00000448213 1675 ntBASIC17.87■□□□□ 0.45
CCNA1P78396 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCNA1P78396 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.86■□□□□ 0.45
CCNA1P78396 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCNA1P78396 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.86■□□□□ 0.45
CCNA1P78396 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCNA1P78396 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCNA1P78396 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CCNA1P78396 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCNA1P78396 BTBD6P1-201ENST00000412176 1267 ntBASIC17.86■□□□□ 0.45
CCNA1P78396 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.86■□□□□ 0.45
CCNA1P78396 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.86■□□□□ 0.45
CCNA1P78396 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC17.86■□□□□ 0.45
CCNA1P78396 GAPDHP40-201ENST00000505218 1006 ntBASIC17.86■□□□□ 0.45
CCNA1P78396 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.86■□□□□ 0.45
CCNA1P78396 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.86■□□□□ 0.45
CCNA1P78396 AC078819.1-201ENST00000547454 765 ntBASIC17.86■□□□□ 0.45
CCNA1P78396 AC012085.1-201ENST00000548270 765 ntBASIC17.86■□□□□ 0.45
CCNA1P78396 C2orf69P2-201ENST00000562032 1123 ntBASIC17.86■□□□□ 0.45
CCNA1P78396 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms