Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.67■□□□□ 0.1
SRP54P61011 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRP54P61011 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SRP54P61011 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRP54P61011 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRP54P61011 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SRP54P61011 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRP54P61011 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRP54P61011 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRP54P61011 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.67■□□□□ 0.1
SRP54P61011 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRP54P61011 AC007326.2-201ENST00000624224 7579 ntBASIC15.67■□□□□ 0.1
SRP54P61011 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRP54P61011 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRP54P61011 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRP54P61011 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRP54P61011 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRP54P61011 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SRP54P61011 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SRP54P61011 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SRP54P61011 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SRP54P61011 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SRP54P61011 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRP54P61011 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRP54P61011 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.66■□□□□ 0.1
SRP54P61011 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SRP54P61011 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRP54P61011 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRP54P61011 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.66■□□□□ 0.1
SRP54P61011 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SRP54P61011 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SRP54P61011 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
SRP54P61011 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRP54P61011 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SRP54P61011 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SRP54P61011 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRP54P61011 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SRP54P61011 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRP54P61011 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SRP54P61011 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRP54P61011 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRP54P61011 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRP54P61011 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SRP54P61011 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.66■□□□□ 0.1
SRP54P61011 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.66■□□□□ 0.1
SRP54P61011 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.66■□□□□ 0.1
SRP54P61011 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SRP54P61011 PCDHB19P-201ENST00000570871 2371 ntBASIC15.66■□□□□ 0.1
SRP54P61011 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.66■□□□□ 0.1
SRP54P61011 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRP54P61011 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.66■□□□□ 0.1
SRP54P61011 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SRP54P61011 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRP54P61011 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRP54P61011 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.66■□□□□ 0.1
SRP54P61011 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRP54P61011 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
SRP54P61011 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SRP54P61011 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRP54P61011 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SRP54P61011 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SRP54P61011 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRP54P61011 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.66■□□□□ 0.1
SRP54P61011 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
SRP54P61011 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.66■□□□□ 0.1
SRP54P61011 AC079328.2-201ENST00000561241 3354 ntBASIC15.66■□□□□ 0.1
SRP54P61011 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SRP54P61011 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SRP54P61011 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRP54P61011 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.65■□□□□ 0.1
SRP54P61011 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
SRP54P61011 HYMAI-201ENST00000635591 3347 ntBASIC15.65■□□□□ 0.1
SRP54P61011 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SRP54P61011 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SRP54P61011 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SRP54P61011 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRP54P61011 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.65■□□□□ 0.1
SRP54P61011 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SRP54P61011 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SRP54P61011 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRP54P61011 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRP54P61011 GK-202ENST00000378941 458 ntTSL 3 BASIC15.65■□□□□ 0.1
SRP54P61011 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.65■□□□□ 0.1
SRP54P61011 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.65■□□□□ 0.1
SRP54P61011 TARDBPP1-201ENST00000442013 1203 ntBASIC15.65■□□□□ 0.1
SRP54P61011 AC244107.1-201ENST00000442033 332 ntBASIC15.65■□□□□ 0.1
SRP54P61011 PHKG1P2-201ENST00000457537 863 ntBASIC15.65■□□□□ 0.1
SRP54P61011 AC011495.1-201ENST00000498085 584 ntBASIC15.65■□□□□ 0.1
SRP54P61011 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.65■□□□□ 0.1
SRP54P61011 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.65■□□□□ 0.1
SRP54P61011 RARRES2P5-201ENST00000564013 466 ntBASIC15.65■□□□□ 0.1
SRP54P61011 RRP7BP-205ENST00000566851 833 ntBASIC15.65■□□□□ 0.1
SRP54P61011 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.65■□□□□ 0.1
SRP54P61011 AC093726.1-201ENST00000608064 963 ntBASIC15.65■□□□□ 0.1
SRP54P61011 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRP54P61011 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.65■□□□□ 0.1
SRP54P61011 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRP54P61011 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SRP54P61011 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRP54P61011 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms