Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
VSX2P58304 AC069224.1-201ENST00000566372 1715 ntBASIC15.21■□□□□ 0.03
VSX2P58304 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
VSX2P58304 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
VSX2P58304 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.21■□□□□ 0.03
VSX2P58304 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
VSX2P58304 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VSX2P58304 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
VSX2P58304 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VSX2P58304 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
VSX2P58304 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.21■□□□□ 0.03
VSX2P58304 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.21■□□□□ 0.03
VSX2P58304 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
VSX2P58304 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
VSX2P58304 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.21■□□□□ 0.03
VSX2P58304 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.21■□□□□ 0.03
VSX2P58304 PHKG1P2-201ENST00000457537 863 ntBASIC15.21■□□□□ 0.03
VSX2P58304 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
VSX2P58304 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.21■□□□□ 0.03
VSX2P58304 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
VSX2P58304 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
VSX2P58304 AL450472.2-201ENST00000603663 1156 ntBASIC15.21■□□□□ 0.03
VSX2P58304 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.21■□□□□ 0.03
VSX2P58304 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VSX2P58304 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VSX2P58304 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
VSX2P58304 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VSX2P58304 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
VSX2P58304 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
VSX2P58304 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
VSX2P58304 AC018892.3-201ENST00000623986 2499 ntBASIC15.21■□□□□ 0.02
VSX2P58304 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
VSX2P58304 BTBD7P1-201ENST00000447253 1453 ntBASIC15.2■□□□□ 0.02
VSX2P58304 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
VSX2P58304 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
VSX2P58304 LINC02447-202ENST00000501888 2146 ntBASIC15.2■□□□□ 0.02
VSX2P58304 CDC14C-201ENST00000428251 1719 ntBASIC15.2■□□□□ 0.02
VSX2P58304 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VSX2P58304 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VSX2P58304 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.2■□□□□ 0.02
VSX2P58304 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VSX2P58304 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VSX2P58304 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.2■□□□□ 0.02
VSX2P58304 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VSX2P58304 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.2■□□□□ 0.02
VSX2P58304 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VSX2P58304 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
VSX2P58304 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VSX2P58304 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VSX2P58304 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.2■□□□□ 0.02
VSX2P58304 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VSX2P58304 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
VSX2P58304 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VSX2P58304 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.2■□□□□ 0.02
VSX2P58304 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VSX2P58304 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.2■□□□□ 0.02
VSX2P58304 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VSX2P58304 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.2■□□□□ 0.02
VSX2P58304 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.2■□□□□ 0.02
VSX2P58304 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.2■□□□□ 0.02
VSX2P58304 TERF1P3-201ENST00000505638 1227 ntBASIC15.2■□□□□ 0.02
VSX2P58304 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.2■□□□□ 0.02
VSX2P58304 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
VSX2P58304 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
VSX2P58304 AC025048.3-201ENST00000590609 569 ntBASIC15.2■□□□□ 0.02
VSX2P58304 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
VSX2P58304 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.2■□□□□ 0.02
VSX2P58304 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.2■□□□□ 0.02
VSX2P58304 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.2■□□□□ 0.02
VSX2P58304 AC005702.4-201ENST00000618393 416 ntBASIC15.2■□□□□ 0.02
VSX2P58304 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.2■□□□□ 0.02
VSX2P58304 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.2■□□□□ 0.02
VSX2P58304 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VSX2P58304 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.2■□□□□ 0.02
VSX2P58304 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.2■□□□□ 0.02
VSX2P58304 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
VSX2P58304 AC024909.3-201ENST00000611513 2257 ntBASIC15.2■□□□□ 0.02
VSX2P58304 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
VSX2P58304 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.2■□□□□ 0.02
VSX2P58304 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VSX2P58304 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.2■□□□□ 0.02
VSX2P58304 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VSX2P58304 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VSX2P58304 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
VSX2P58304 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VSX2P58304 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.2■□□□□ 0.02
VSX2P58304 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VSX2P58304 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
VSX2P58304 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
VSX2P58304 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.19■□□□□ 0.02
VSX2P58304 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
VSX2P58304 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.19■□□□□ 0.02
VSX2P58304 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VSX2P58304 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VSX2P58304 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.19■□□□□ 0.02
VSX2P58304 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.19■□□□□ 0.02
VSX2P58304 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VSX2P58304 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
VSX2P58304 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
VSX2P58304 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms