Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 AC138932.2-201ENST00000548268 1459 ntBASIC20.67■□□□□ 0.9
RIPK4P57078 AC126755.4-201ENST00000549796 1459 ntBASIC20.67■□□□□ 0.9
RIPK4P57078 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RIPK4P57078 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RIPK4P57078 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RIPK4P57078 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RIPK4P57078 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RIPK4P57078 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RIPK4P57078 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC20.66■□□□□ 0.9
RIPK4P57078 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
RIPK4P57078 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RIPK4P57078 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
RIPK4P57078 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RIPK4P57078 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RIPK4P57078 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RIPK4P57078 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RIPK4P57078 AC087499.6-201ENST00000411576 835 ntBASIC20.66■□□□□ 0.9
RIPK4P57078 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC20.66■□□□□ 0.9
RIPK4P57078 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC20.66■□□□□ 0.9
RIPK4P57078 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RIPK4P57078 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC20.66■□□□□ 0.9
RIPK4P57078 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC20.66■□□□□ 0.9
RIPK4P57078 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC20.66■□□□□ 0.9
RIPK4P57078 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC20.66■□□□□ 0.9
RIPK4P57078 AC099568.2-201ENST00000609194 695 ntBASIC20.66■□□□□ 0.9
RIPK4P57078 AC025048.6-201ENST00000634326 1161 ntBASIC20.66■□□□□ 0.9
RIPK4P57078 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC20.66■□□□□ 0.9
RIPK4P57078 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC20.66■□□□□ 0.9
RIPK4P57078 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RIPK4P57078 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RIPK4P57078 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC20.66■□□□□ 0.9
RIPK4P57078 ILF3-AS1-201ENST00000591501 1983 ntBASIC20.66■□□□□ 0.9
RIPK4P57078 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC20.66■□□□□ 0.9
RIPK4P57078 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RIPK4P57078 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RIPK4P57078 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RIPK4P57078 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RIPK4P57078 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RIPK4P57078 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC20.65■□□□□ 0.9
RIPK4P57078 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RIPK4P57078 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC20.65■□□□□ 0.9
RIPK4P57078 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RIPK4P57078 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RIPK4P57078 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC20.65■□□□□ 0.9
RIPK4P57078 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RIPK4P57078 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC20.65■□□□□ 0.9
RIPK4P57078 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RIPK4P57078 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC20.65■□□□□ 0.9
RIPK4P57078 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC20.65■□□□□ 0.9
RIPK4P57078 RN7SL399P-201ENST00000471648 279 ntBASIC20.65■□□□□ 0.9
RIPK4P57078 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC20.65■□□□□ 0.9
RIPK4P57078 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC20.65■□□□□ 0.9
RIPK4P57078 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC20.65■□□□□ 0.9
RIPK4P57078 AC140912.1-201ENST00000577171 1054 ntBASIC20.65■□□□□ 0.9
RIPK4P57078 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC20.65■□□□□ 0.9
RIPK4P57078 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC20.65■□□□□ 0.9
RIPK4P57078 AC008494.3-201ENST00000606615 944 ntBASIC20.65■□□□□ 0.9
RIPK4P57078 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RIPK4P57078 AC105233.6-201ENST00000642093 218 ntBASIC20.65■□□□□ 0.9
RIPK4P57078 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC20.65■□□□□ 0.9
RIPK4P57078 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RIPK4P57078 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RIPK4P57078 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RIPK4P57078 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RIPK4P57078 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RIPK4P57078 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RIPK4P57078 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC20.65■□□□□ 0.9
RIPK4P57078 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RIPK4P57078 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC20.65■□□□□ 0.9
RIPK4P57078 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RIPK4P57078 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RIPK4P57078 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC20.64■□□□□ 0.9
RIPK4P57078 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RIPK4P57078 AGK-211ENST00000629555 2765 ntTSL 5 BASIC20.64■□□□□ 0.9
RIPK4P57078 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RIPK4P57078 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RIPK4P57078 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RIPK4P57078 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RIPK4P57078 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RIPK4P57078 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RIPK4P57078 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RIPK4P57078 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RIPK4P57078 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RIPK4P57078 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RIPK4P57078 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RIPK4P57078 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC20.64■□□□□ 0.89
RIPK4P57078 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
RIPK4P57078 PKIG-203ENST00000372887 769 ntTSL 3 BASIC20.64■□□□□ 0.89
RIPK4P57078 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC20.64■□□□□ 0.89
RIPK4P57078 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
RIPK4P57078 DGCR5-201ENST00000399539 862 ntBASIC20.64■□□□□ 0.89
RIPK4P57078 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
RIPK4P57078 MDH2-205ENST00000461263 648 ntTSL 2 BASIC20.64■□□□□ 0.89
RIPK4P57078 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RIPK4P57078 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
RIPK4P57078 AC123567.1-201ENST00000548294 1261 ntBASIC20.64■□□□□ 0.89
RIPK4P57078 AC007431.3-201ENST00000623221 587 ntBASIC20.64■□□□□ 0.89
RIPK4P57078 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC20.64■□□□□ 0.89
RIPK4P57078 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RIPK4P57078 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms