Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NCKAP1LP55160 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCKAP1LP55160 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.28■□□□□ 0.36
NCKAP1LP55160 AC008741.2-201ENST00000612792 3115 ntBASIC17.28■□□□□ 0.36
NCKAP1LP55160 AC092850.2-201ENST00000623821 2697 ntBASIC17.28■□□□□ 0.36
NCKAP1LP55160 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCKAP1LP55160 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCKAP1LP55160 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.28■□□□□ 0.36
NCKAP1LP55160 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.28■□□□□ 0.36
NCKAP1LP55160 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCKAP1LP55160 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NCKAP1LP55160 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NCKAP1LP55160 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCKAP1LP55160 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCKAP1LP55160 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCKAP1LP55160 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.28■□□□□ 0.36
NCKAP1LP55160 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.28■□□□□ 0.36
NCKAP1LP55160 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.28■□□□□ 0.36
NCKAP1LP55160 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
NCKAP1LP55160 AC015910.1-201ENST00000579400 975 ntBASIC17.28■□□□□ 0.36
NCKAP1LP55160 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NCKAP1LP55160 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.28■□□□□ 0.36
NCKAP1LP55160 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.28■□□□□ 0.36
NCKAP1LP55160 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NCKAP1LP55160 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NCKAP1LP55160 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCKAP1LP55160 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCKAP1LP55160 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NCKAP1LP55160 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
NCKAP1LP55160 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NCKAP1LP55160 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NCKAP1LP55160 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCKAP1LP55160 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.28■□□□□ 0.36
NCKAP1LP55160 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.28■□□□□ 0.36
NCKAP1LP55160 NFIC-211ENST00000641145 8399 ntBASIC17.28■□□□□ 0.36
NCKAP1LP55160 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCKAP1LP55160 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NCKAP1LP55160 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCKAP1LP55160 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
NCKAP1LP55160 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NCKAP1LP55160 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCKAP1LP55160 AL121723.1-201ENST00000445194 1519 ntBASIC17.27■□□□□ 0.36
NCKAP1LP55160 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.27■□□□□ 0.36
NCKAP1LP55160 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.27■□□□□ 0.36
NCKAP1LP55160 AC020658.6-201ENST00000623564 1870 ntBASIC17.27■□□□□ 0.36
NCKAP1LP55160 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCKAP1LP55160 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.27■□□□□ 0.36
NCKAP1LP55160 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.27■□□□□ 0.36
NCKAP1LP55160 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.27■□□□□ 0.36
NCKAP1LP55160 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCKAP1LP55160 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NCKAP1LP55160 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCKAP1LP55160 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.27■□□□□ 0.36
NCKAP1LP55160 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.27■□□□□ 0.36
NCKAP1LP55160 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCKAP1LP55160 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCKAP1LP55160 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.27■□□□□ 0.36
NCKAP1LP55160 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.27■□□□□ 0.36
NCKAP1LP55160 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
NCKAP1LP55160 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.27■□□□□ 0.36
NCKAP1LP55160 KRT18P43-201ENST00000469825 1281 ntBASIC17.27■□□□□ 0.36
NCKAP1LP55160 AC093004.1-201ENST00000508850 424 ntBASIC17.27■□□□□ 0.36
NCKAP1LP55160 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NCKAP1LP55160 TPRX2P-201ENST00000535362 881 ntBASIC17.27■□□□□ 0.36
NCKAP1LP55160 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.27■□□□□ 0.36
NCKAP1LP55160 RARRES2P5-201ENST00000564013 466 ntBASIC17.27■□□□□ 0.36
NCKAP1LP55160 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
NCKAP1LP55160 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCKAP1LP55160 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCKAP1LP55160 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.27■□□□□ 0.36
NCKAP1LP55160 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.27■□□□□ 0.36
NCKAP1LP55160 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.27■□□□□ 0.36
NCKAP1LP55160 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NCKAP1LP55160 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
NCKAP1LP55160 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
NCKAP1LP55160 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NCKAP1LP55160 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NCKAP1LP55160 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
NCKAP1LP55160 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NCKAP1LP55160 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.27■□□□□ 0.35
NCKAP1LP55160 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NCKAP1LP55160 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NCKAP1LP55160 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NCKAP1LP55160 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCKAP1LP55160 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCKAP1LP55160 PAUPAR-201ENST00000630360 2965 ntBASIC17.26■□□□□ 0.35
NCKAP1LP55160 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
NCKAP1LP55160 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCKAP1LP55160 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCKAP1LP55160 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCKAP1LP55160 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCKAP1LP55160 AC090616.6-203ENST00000579186 1945 ntBASIC17.26■□□□□ 0.35
NCKAP1LP55160 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCKAP1LP55160 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NCKAP1LP55160 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCKAP1LP55160 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.26■□□□□ 0.35
NCKAP1LP55160 AL133267.1-201ENST00000398220 340 ntBASIC17.26■□□□□ 0.35
NCKAP1LP55160 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.26■□□□□ 0.35
NCKAP1LP55160 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.26■□□□□ 0.35
NCKAP1LP55160 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms