Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.24■□□□□ 0.03
EPHA4P54764 AL162726.2-201ENST00000438986 1017 ntBASIC15.24■□□□□ 0.03
EPHA4P54764 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.24■□□□□ 0.03
EPHA4P54764 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
EPHA4P54764 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.24■□□□□ 0.03
EPHA4P54764 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.24■□□□□ 0.03
EPHA4P54764 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.24■□□□□ 0.03
EPHA4P54764 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
EPHA4P54764 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.24■□□□□ 0.03
EPHA4P54764 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.24■□□□□ 0.03
EPHA4P54764 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.24■□□□□ 0.03
EPHA4P54764 AC015936.2-201ENST00000593177 259 ntBASIC15.24■□□□□ 0.03
EPHA4P54764 BRI3BPP1-201ENST00000594224 787 ntBASIC15.24■□□□□ 0.03
EPHA4P54764 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.24■□□□□ 0.03
EPHA4P54764 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.24■□□□□ 0.03
EPHA4P54764 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
EPHA4P54764 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
EPHA4P54764 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
EPHA4P54764 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
EPHA4P54764 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
EPHA4P54764 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
EPHA4P54764 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
EPHA4P54764 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.24■□□□□ 0.03
EPHA4P54764 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
EPHA4P54764 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.24■□□□□ 0.03
EPHA4P54764 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
EPHA4P54764 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.24■□□□□ 0.03
EPHA4P54764 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.24■□□□□ 0.03
EPHA4P54764 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPHA4P54764 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
EPHA4P54764 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
EPHA4P54764 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPHA4P54764 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPHA4P54764 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
EPHA4P54764 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
EPHA4P54764 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPHA4P54764 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
EPHA4P54764 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPHA4P54764 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
EPHA4P54764 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.23■□□□□ 0.03
EPHA4P54764 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPHA4P54764 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.23■□□□□ 0.03
EPHA4P54764 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
EPHA4P54764 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.23■□□□□ 0.03
EPHA4P54764 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
EPHA4P54764 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
EPHA4P54764 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
EPHA4P54764 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.23■□□□□ 0.03
EPHA4P54764 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
EPHA4P54764 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.23■□□□□ 0.03
EPHA4P54764 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.23■□□□□ 0.03
EPHA4P54764 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.23■□□□□ 0.03
EPHA4P54764 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
EPHA4P54764 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.23■□□□□ 0.03
EPHA4P54764 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.23■□□□□ 0.03
EPHA4P54764 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.23■□□□□ 0.03
EPHA4P54764 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.23■□□□□ 0.03
EPHA4P54764 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.23■□□□□ 0.03
EPHA4P54764 AL359881.2-201ENST00000602973 570 ntBASIC15.23■□□□□ 0.03
EPHA4P54764 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.23■□□□□ 0.03
EPHA4P54764 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
EPHA4P54764 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.23■□□□□ 0.03
EPHA4P54764 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.23■□□□□ 0.03
EPHA4P54764 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.23■□□□□ 0.03
EPHA4P54764 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.23■□□□□ 0.03
EPHA4P54764 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
EPHA4P54764 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPHA4P54764 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPHA4P54764 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPHA4P54764 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPHA4P54764 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
EPHA4P54764 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
EPHA4P54764 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.23■□□□□ 0.03
EPHA4P54764 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
EPHA4P54764 AL607033.1-201ENST00000623900 1599 ntBASIC15.23■□□□□ 0.03
EPHA4P54764 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
EPHA4P54764 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPHA4P54764 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
EPHA4P54764 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
EPHA4P54764 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.23■□□□□ 0.03
EPHA4P54764 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPHA4P54764 AC022188.1-201ENST00000620960 1664 ntBASIC15.22■□□□□ 0.03
EPHA4P54764 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPHA4P54764 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.22■□□□□ 0.03
EPHA4P54764 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPHA4P54764 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.22■□□□□ 0.03
EPHA4P54764 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPHA4P54764 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.22■□□□□ 0.03
EPHA4P54764 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPHA4P54764 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.22■□□□□ 0.03
EPHA4P54764 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPHA4P54764 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.22■□□□□ 0.03
EPHA4P54764 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.22■□□□□ 0.03
EPHA4P54764 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.22■□□□□ 0.03
EPHA4P54764 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPHA4P54764 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.22■□□□□ 0.03
EPHA4P54764 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPHA4P54764 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPHA4P54764 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
EPHA4P54764 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms