Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CACNA2D1P54289 AC010491.1-201ENST00000563101 2797 ntBASIC16.82■□□□□ 0.28
CACNA2D1P54289 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CACNA2D1P54289 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CACNA2D1P54289 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CACNA2D1P54289 SPDYE19P-201ENST00000338590 713 ntBASIC16.82■□□□□ 0.28
CACNA2D1P54289 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CACNA2D1P54289 AC015922.1-201ENST00000421102 1152 ntBASIC16.82■□□□□ 0.28
CACNA2D1P54289 TARDBPP1-201ENST00000442013 1203 ntBASIC16.82■□□□□ 0.28
CACNA2D1P54289 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.82■□□□□ 0.28
CACNA2D1P54289 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.82■□□□□ 0.28
CACNA2D1P54289 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.82■□□□□ 0.28
CACNA2D1P54289 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.82■□□□□ 0.28
CACNA2D1P54289 AC004233.3-201ENST00000607794 1269 ntBASIC16.82■□□□□ 0.28
CACNA2D1P54289 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.82■□□□□ 0.28
CACNA2D1P54289 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CACNA2D1P54289 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CACNA2D1P54289 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.82■□□□□ 0.28
CACNA2D1P54289 AL513523.2-202ENST00000427283 2040 ntBASIC16.82■□□□□ 0.28
CACNA2D1P54289 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CACNA2D1P54289 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CACNA2D1P54289 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.82■□□□□ 0.28
CACNA2D1P54289 CDC14C-201ENST00000428251 1719 ntBASIC16.82■□□□□ 0.28
CACNA2D1P54289 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CACNA2D1P54289 Z97205.2-201ENST00000564697 1639 ntBASIC16.81■□□□□ 0.28
CACNA2D1P54289 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CACNA2D1P54289 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CACNA2D1P54289 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.81■□□□□ 0.28
CACNA2D1P54289 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CACNA2D1P54289 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CACNA2D1P54289 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.81■□□□□ 0.28
CACNA2D1P54289 AL603832.2-201ENST00000566195 2125 ntBASIC16.81■□□□□ 0.28
CACNA2D1P54289 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CACNA2D1P54289 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CACNA2D1P54289 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CACNA2D1P54289 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CACNA2D1P54289 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CACNA2D1P54289 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CACNA2D1P54289 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CACNA2D1P54289 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CACNA2D1P54289 CRB3P1-201ENST00000449338 276 ntBASIC16.81■□□□□ 0.28
CACNA2D1P54289 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CACNA2D1P54289 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CACNA2D1P54289 DOC2GP-202ENST00000514950 1163 ntBASIC16.81■□□□□ 0.28
CACNA2D1P54289 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.81■□□□□ 0.28
CACNA2D1P54289 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CACNA2D1P54289 HNRNPUP1-201ENST00000554987 333 ntBASIC16.81■□□□□ 0.28
CACNA2D1P54289 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.81■□□□□ 0.28
CACNA2D1P54289 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CACNA2D1P54289 AC074044.1-201ENST00000609673 707 ntBASIC16.81■□□□□ 0.28
CACNA2D1P54289 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.81■□□□□ 0.28
CACNA2D1P54289 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CACNA2D1P54289 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CACNA2D1P54289 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CACNA2D1P54289 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CACNA2D1P54289 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CACNA2D1P54289 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CACNA2D1P54289 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CACNA2D1P54289 LINC02447-202ENST00000501888 2146 ntBASIC16.81■□□□□ 0.28
CACNA2D1P54289 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.81■□□□□ 0.28
CACNA2D1P54289 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CACNA2D1P54289 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CACNA2D1P54289 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CACNA2D1P54289 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.8■□□□□ 0.28
CACNA2D1P54289 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.8■□□□□ 0.28
CACNA2D1P54289 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CACNA2D1P54289 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CACNA2D1P54289 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CACNA2D1P54289 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CACNA2D1P54289 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CACNA2D1P54289 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.8■□□□□ 0.28
CACNA2D1P54289 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CACNA2D1P54289 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CACNA2D1P54289 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CACNA2D1P54289 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.8■□□□□ 0.28
CACNA2D1P54289 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CACNA2D1P54289 KRT18P64-201ENST00000434946 1219 ntBASIC16.8■□□□□ 0.28
CACNA2D1P54289 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.8■□□□□ 0.28
CACNA2D1P54289 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.8■□□□□ 0.28
CACNA2D1P54289 PHKG1P2-201ENST00000457537 863 ntBASIC16.8■□□□□ 0.28
CACNA2D1P54289 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.8■□□□□ 0.28
CACNA2D1P54289 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.8■□□□□ 0.28
CACNA2D1P54289 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.8■□□□□ 0.28
CACNA2D1P54289 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.8■□□□□ 0.28
CACNA2D1P54289 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.8■□□□□ 0.28
CACNA2D1P54289 SPDYE22P-201ENST00000582158 798 ntBASIC16.8■□□□□ 0.28
CACNA2D1P54289 AL132655.2-201ENST00000596276 594 ntBASIC16.8■□□□□ 0.28
CACNA2D1P54289 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.8■□□□□ 0.28
CACNA2D1P54289 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.8■□□□□ 0.28
CACNA2D1P54289 AF228730.6-201ENST00000641497 218 ntBASIC16.8■□□□□ 0.28
CACNA2D1P54289 AC084121.3-201ENST00000641716 218 ntBASIC16.8■□□□□ 0.28
CACNA2D1P54289 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CACNA2D1P54289 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CACNA2D1P54289 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CACNA2D1P54289 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.8■□□□□ 0.28
CACNA2D1P54289 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CACNA2D1P54289 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CACNA2D1P54289 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CACNA2D1P54289 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CACNA2D1P54289 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms