Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDK7P50613 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.44■□□□□ 0.38
CDK7P50613 AC106886.4-201ENST00000623557 2502 ntBASIC17.44■□□□□ 0.38
CDK7P50613 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDK7P50613 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.44■□□□□ 0.38
CDK7P50613 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDK7P50613 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDK7P50613 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDK7P50613 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CDK7P50613 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDK7P50613 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.43■□□□□ 0.38
CDK7P50613 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDK7P50613 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDK7P50613 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDK7P50613 AC006001.1-201ENST00000325130 474 ntBASIC17.43■□□□□ 0.38
CDK7P50613 ELK2AP-201ENST00000392510 1007 ntBASIC17.43■□□□□ 0.38
CDK7P50613 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDK7P50613 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDK7P50613 C2orf27AP3-201ENST00000434123 579 ntBASIC17.43■□□□□ 0.38
CDK7P50613 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDK7P50613 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC17.43■□□□□ 0.38
CDK7P50613 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
CDK7P50613 AC025279.2-201ENST00000569730 653 ntBASIC17.43■□□□□ 0.38
CDK7P50613 AL354718.3-201ENST00000616414 581 ntBASIC17.43■□□□□ 0.38
CDK7P50613 CR382287.1-201ENST00000623954 586 ntBASIC17.43■□□□□ 0.38
CDK7P50613 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CDK7P50613 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CDK7P50613 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CDK7P50613 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
CDK7P50613 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDK7P50613 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.43■□□□□ 0.38
CDK7P50613 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDK7P50613 AL607033.1-201ENST00000623900 1599 ntBASIC17.43■□□□□ 0.38
CDK7P50613 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CDK7P50613 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDK7P50613 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
CDK7P50613 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
CDK7P50613 HLA-A-202ENST00000376806 1854 ntBASIC17.43■□□□□ 0.38
CDK7P50613 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDK7P50613 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDK7P50613 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CDK7P50613 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDK7P50613 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.43■□□□□ 0.38
CDK7P50613 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDK7P50613 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDK7P50613 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK7P50613 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK7P50613 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK7P50613 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.42■□□□□ 0.38
CDK7P50613 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.42■□□□□ 0.38
CDK7P50613 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK7P50613 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CDK7P50613 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK7P50613 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK7P50613 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CDK7P50613 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.42■□□□□ 0.38
CDK7P50613 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.42■□□□□ 0.38
CDK7P50613 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.42■□□□□ 0.38
CDK7P50613 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK7P50613 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
CDK7P50613 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK7P50613 DRD5P1-201ENST00000456605 1438 ntBASIC17.42■□□□□ 0.38
CDK7P50613 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK7P50613 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK7P50613 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK7P50613 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDK7P50613 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK7P50613 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.42■□□□□ 0.38
CDK7P50613 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.42■□□□□ 0.38
CDK7P50613 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC17.42■□□□□ 0.38
CDK7P50613 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.42■□□□□ 0.38
CDK7P50613 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.42■□□□□ 0.38
CDK7P50613 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.42■□□□□ 0.38
CDK7P50613 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.42■□□□□ 0.38
CDK7P50613 HNRNPUP1-201ENST00000554987 333 ntBASIC17.42■□□□□ 0.38
CDK7P50613 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.42■□□□□ 0.38
CDK7P50613 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CDK7P50613 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.42■□□□□ 0.38
CDK7P50613 AC097359.3-201ENST00000603982 1210 ntBASIC17.42■□□□□ 0.38
CDK7P50613 AL022328.3-201ENST00000607943 679 ntBASIC17.42■□□□□ 0.38
CDK7P50613 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.42■□□□□ 0.38
CDK7P50613 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDK7P50613 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CDK7P50613 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.42■□□□□ 0.38
CDK7P50613 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK7P50613 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK7P50613 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDK7P50613 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK7P50613 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.42■□□□□ 0.38
CDK7P50613 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK7P50613 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.41■□□□□ 0.38
CDK7P50613 AC105020.1-201ENST00000435356 2205 ntBASIC17.41■□□□□ 0.38
CDK7P50613 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDK7P50613 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDK7P50613 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK7P50613 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.41■□□□□ 0.38
CDK7P50613 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK7P50613 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK7P50613 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.41■□□□□ 0.38
CDK7P50613 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms