Protein–RNA interactions for Protein: P49840

GSK3A, Glycogen synthase kinase-3 alpha, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSK3AP49840 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.9□□□□□ -0.18
GSK3AP49840 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GSK3AP49840 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
GSK3AP49840 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
GSK3AP49840 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.9□□□□□ -0.18
GSK3AP49840 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.9□□□□□ -0.18
GSK3AP49840 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
GSK3AP49840 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
GSK3AP49840 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
GSK3AP49840 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
GSK3AP49840 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
GSK3AP49840 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.9□□□□□ -0.18
GSK3AP49840 AL109954.1-202ENST00000564051 2148 ntBASIC13.9□□□□□ -0.18
GSK3AP49840 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
GSK3AP49840 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GSK3AP49840 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GSK3AP49840 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
GSK3AP49840 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GSK3AP49840 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.9□□□□□ -0.18
GSK3AP49840 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.9□□□□□ -0.18
GSK3AP49840 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
GSK3AP49840 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GSK3AP49840 MIR346-201ENST00000362234 95 ntBASIC13.9□□□□□ -0.18
GSK3AP49840 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.9□□□□□ -0.18
GSK3AP49840 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
GSK3AP49840 SERPINA7P1-201ENST00000443077 631 ntBASIC13.9□□□□□ -0.18
GSK3AP49840 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.9□□□□□ -0.18
GSK3AP49840 ALG1L5P-201ENST00000482043 771 ntBASIC13.9□□□□□ -0.18
GSK3AP49840 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.9□□□□□ -0.18
GSK3AP49840 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.9□□□□□ -0.18
GSK3AP49840 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.9□□□□□ -0.18
GSK3AP49840 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.9□□□□□ -0.18
GSK3AP49840 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.9□□□□□ -0.18
GSK3AP49840 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.9□□□□□ -0.18
GSK3AP49840 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.9□□□□□ -0.18
GSK3AP49840 AC022726.2-201ENST00000634673 547 ntBASIC13.9□□□□□ -0.18
GSK3AP49840 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
GSK3AP49840 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GSK3AP49840 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
GSK3AP49840 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.9□□□□□ -0.18
GSK3AP49840 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GSK3AP49840 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
GSK3AP49840 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
GSK3AP49840 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.9□□□□□ -0.18
GSK3AP49840 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.9□□□□□ -0.18
GSK3AP49840 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
GSK3AP49840 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
GSK3AP49840 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.9□□□□□ -0.18
GSK3AP49840 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.9□□□□□ -0.19
GSK3AP49840 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
GSK3AP49840 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
GSK3AP49840 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.19
GSK3AP49840 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
GSK3AP49840 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
GSK3AP49840 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.9□□□□□ -0.19
GSK3AP49840 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.89□□□□□ -0.19
GSK3AP49840 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GSK3AP49840 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GSK3AP49840 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GSK3AP49840 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GSK3AP49840 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GSK3AP49840 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
GSK3AP49840 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.89□□□□□ -0.19
GSK3AP49840 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
GSK3AP49840 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
GSK3AP49840 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.89□□□□□ -0.19
GSK3AP49840 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
GSK3AP49840 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GSK3AP49840 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
GSK3AP49840 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GSK3AP49840 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GSK3AP49840 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GSK3AP49840 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
GSK3AP49840 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GSK3AP49840 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GSK3AP49840 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GSK3AP49840 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
GSK3AP49840 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
GSK3AP49840 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
GSK3AP49840 FAM220BP-201ENST00000377689 816 ntBASIC13.89□□□□□ -0.19
GSK3AP49840 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
GSK3AP49840 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.89□□□□□ -0.19
GSK3AP49840 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.89□□□□□ -0.19
GSK3AP49840 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.89□□□□□ -0.19
GSK3AP49840 AL592309.1-201ENST00000443127 649 ntBASIC13.89□□□□□ -0.19
GSK3AP49840 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GSK3AP49840 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
GSK3AP49840 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.89□□□□□ -0.19
GSK3AP49840 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.89□□□□□ -0.19
GSK3AP49840 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GSK3AP49840 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.89□□□□□ -0.19
GSK3AP49840 AC243562.2-201ENST00000561247 970 ntBASIC13.89□□□□□ -0.19
GSK3AP49840 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
GSK3AP49840 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.89□□□□□ -0.19
GSK3AP49840 AC108359.1-201ENST00000616451 1211 ntBASIC13.89□□□□□ -0.19
GSK3AP49840 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
GSK3AP49840 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
GSK3AP49840 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GSK3AP49840 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.89□□□□□ -0.19
GSK3AP49840 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms