Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SRP9P49458 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SRP9P49458 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.16□□□□□ -0.14
SRP9P49458 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SRP9P49458 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SRP9P49458 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
SRP9P49458 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SRP9P49458 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SRP9P49458 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SRP9P49458 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SRP9P49458 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SRP9P49458 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.15□□□□□ -0.14
SRP9P49458 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SRP9P49458 CICP23-201ENST00000605013 2741 ntBASIC14.15□□□□□ -0.14
SRP9P49458 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SRP9P49458 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SRP9P49458 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SRP9P49458 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SRP9P49458 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SRP9P49458 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.15□□□□□ -0.14
SRP9P49458 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SRP9P49458 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SRP9P49458 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SRP9P49458 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SRP9P49458 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SRP9P49458 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
SRP9P49458 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
SRP9P49458 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SRP9P49458 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SRP9P49458 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SRP9P49458 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.15□□□□□ -0.14
SRP9P49458 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.15□□□□□ -0.14
SRP9P49458 POU5F1P6-201ENST00000466990 990 ntBASIC14.15□□□□□ -0.14
SRP9P49458 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.15□□□□□ -0.14
SRP9P49458 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SRP9P49458 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.15□□□□□ -0.14
SRP9P49458 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.15□□□□□ -0.14
SRP9P49458 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.15□□□□□ -0.14
SRP9P49458 C20orf181-201ENST00000623918 480 ntBASIC14.15□□□□□ -0.14
SRP9P49458 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SRP9P49458 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SRP9P49458 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SRP9P49458 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
SRP9P49458 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SRP9P49458 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
SRP9P49458 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.15□□□□□ -0.14
SRP9P49458 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SRP9P49458 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SRP9P49458 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.15□□□□□ -0.14
SRP9P49458 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SRP9P49458 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SRP9P49458 AC007292.2-201ENST00000593524 1812 ntBASIC14.15□□□□□ -0.14
SRP9P49458 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SRP9P49458 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.15□□□□□ -0.14
SRP9P49458 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SRP9P49458 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SRP9P49458 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.15□□□□□ -0.14
SRP9P49458 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.15□□□□□ -0.15
SRP9P49458 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SRP9P49458 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SRP9P49458 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.14□□□□□ -0.15
SRP9P49458 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SRP9P49458 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SRP9P49458 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
SRP9P49458 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SRP9P49458 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SRP9P49458 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SRP9P49458 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.14□□□□□ -0.15
SRP9P49458 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SRP9P49458 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SRP9P49458 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.14□□□□□ -0.15
SRP9P49458 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SRP9P49458 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SRP9P49458 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SRP9P49458 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.14□□□□□ -0.15
SRP9P49458 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SRP9P49458 YBX2P1-201ENST00000394192 760 ntBASIC14.14□□□□□ -0.15
SRP9P49458 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SRP9P49458 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.14□□□□□ -0.15
SRP9P49458 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.14□□□□□ -0.15
SRP9P49458 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SRP9P49458 ACTG1P14-201ENST00000446382 1122 ntBASIC14.14□□□□□ -0.15
SRP9P49458 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.14□□□□□ -0.15
SRP9P49458 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SRP9P49458 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.14□□□□□ -0.15
SRP9P49458 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
SRP9P49458 AC092865.5-201ENST00000545435 363 ntBASIC14.14□□□□□ -0.15
SRP9P49458 AP002472.1-201ENST00000577490 586 ntBASIC14.14□□□□□ -0.15
SRP9P49458 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SRP9P49458 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.14□□□□□ -0.15
SRP9P49458 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SRP9P49458 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SRP9P49458 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SRP9P49458 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SRP9P49458 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SRP9P49458 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.14□□□□□ -0.15
SRP9P49458 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.14□□□□□ -0.15
SRP9P49458 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.14□□□□□ -0.15
SRP9P49458 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.14□□□□□ -0.15
SRP9P49458 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms