Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.07□□□□□ -0.32
NKX2-1P43699 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX2-1P43699 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.07□□□□□ -0.32
NKX2-1P43699 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NKX2-1P43699 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
NKX2-1P43699 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NKX2-1P43699 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.06□□□□□ -0.32
NKX2-1P43699 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX2-1P43699 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX2-1P43699 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX2-1P43699 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NKX2-1P43699 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NKX2-1P43699 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX2-1P43699 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
NKX2-1P43699 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX2-1P43699 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX2-1P43699 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NKX2-1P43699 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.06□□□□□ -0.32
NKX2-1P43699 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NKX2-1P43699 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NKX2-1P43699 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.06□□□□□ -0.32
NKX2-1P43699 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NKX2-1P43699 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NKX2-1P43699 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX2-1P43699 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX2-1P43699 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13.06□□□□□ -0.32
NKX2-1P43699 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.06□□□□□ -0.32
NKX2-1P43699 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.06□□□□□ -0.32
NKX2-1P43699 ELK2BP-201ENST00000415014 1224 ntBASIC13.06□□□□□ -0.32
NKX2-1P43699 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.06□□□□□ -0.32
NKX2-1P43699 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
NKX2-1P43699 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.06□□□□□ -0.32
NKX2-1P43699 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC13.06□□□□□ -0.32
NKX2-1P43699 RNF151-202ENST00000569210 853 ntTSL 2 BASIC13.06□□□□□ -0.32
NKX2-1P43699 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
NKX2-1P43699 MTDHP4-201ENST00000600287 670 ntBASIC13.06□□□□□ -0.32
NKX2-1P43699 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
NKX2-1P43699 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC13.06□□□□□ -0.32
NKX2-1P43699 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
NKX2-1P43699 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.06□□□□□ -0.32
NKX2-1P43699 AC126365.1-201ENST00000578585 1514 ntBASIC13.06□□□□□ -0.32
NKX2-1P43699 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.06□□□□□ -0.32
NKX2-1P43699 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NKX2-1P43699 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.06□□□□□ -0.32
NKX2-1P43699 AC006504.4-201ENST00000592118 1568 ntBASIC13.06□□□□□ -0.32
NKX2-1P43699 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX2-1P43699 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
NKX2-1P43699 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX2-1P43699 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.06□□□□□ -0.32
NKX2-1P43699 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX2-1P43699 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.06□□□□□ -0.32
NKX2-1P43699 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
NKX2-1P43699 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX2-1P43699 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NKX2-1P43699 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
NKX2-1P43699 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NKX2-1P43699 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
NKX2-1P43699 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
NKX2-1P43699 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.05□□□□□ -0.32
NKX2-1P43699 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
NKX2-1P43699 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NKX2-1P43699 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NKX2-1P43699 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NKX2-1P43699 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC13.05□□□□□ -0.32
NKX2-1P43699 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NKX2-1P43699 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
NKX2-1P43699 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NKX2-1P43699 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NKX2-1P43699 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NKX2-1P43699 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
NKX2-1P43699 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
NKX2-1P43699 AC093724.1-201ENST00000448659 1027 ntBASIC13.05□□□□□ -0.32
NKX2-1P43699 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC13.05□□□□□ -0.32
NKX2-1P43699 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC13.05□□□□□ -0.32
NKX2-1P43699 NMU-205ENST00000511469 756 ntTSL 3 BASIC13.05□□□□□ -0.32
NKX2-1P43699 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC13.05□□□□□ -0.32
NKX2-1P43699 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NKX2-1P43699 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC13.05□□□□□ -0.32
NKX2-1P43699 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NKX2-1P43699 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NKX2-1P43699 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
NKX2-1P43699 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
NKX2-1P43699 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
NKX2-1P43699 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NKX2-1P43699 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.05□□□□□ -0.32
NKX2-1P43699 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
NKX2-1P43699 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
NKX2-1P43699 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NKX2-1P43699 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.05□□□□□ -0.32
NKX2-1P43699 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NKX2-1P43699 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.05□□□□□ -0.32
NKX2-1P43699 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.05□□□□□ -0.32
NKX2-1P43699 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NKX2-1P43699 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NKX2-1P43699 KRT8P44-201ENST00000441609 1350 ntBASIC13.05□□□□□ -0.32
NKX2-1P43699 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NKX2-1P43699 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NKX2-1P43699 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.05□□□□□ -0.32
NKX2-1P43699 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.05□□□□□ -0.32
NKX2-1P43699 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms