Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
GRIA1P42261 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
GRIA1P42261 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
GRIA1P42261 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
GRIA1P42261 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
GRIA1P42261 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
GRIA1P42261 AL607033.1-201ENST00000623900 1599 ntBASIC16.08■□□□□ 0.16
GRIA1P42261 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.08■□□□□ 0.16
GRIA1P42261 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
GRIA1P42261 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
GRIA1P42261 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
GRIA1P42261 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
GRIA1P42261 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.07■□□□□ 0.16
GRIA1P42261 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.07■□□□□ 0.16
GRIA1P42261 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.07■□□□□ 0.16
GRIA1P42261 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GRIA1P42261 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
GRIA1P42261 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
GRIA1P42261 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.07■□□□□ 0.16
GRIA1P42261 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
GRIA1P42261 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GRIA1P42261 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.07■□□□□ 0.16
GRIA1P42261 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
GRIA1P42261 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.07■□□□□ 0.16
GRIA1P42261 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.07■□□□□ 0.16
GRIA1P42261 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GRIA1P42261 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.07■□□□□ 0.16
GRIA1P42261 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
GRIA1P42261 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
GRIA1P42261 UPF3AP3-201ENST00000420996 769 ntBASIC16.07■□□□□ 0.16
GRIA1P42261 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.07■□□□□ 0.16
GRIA1P42261 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.07■□□□□ 0.16
GRIA1P42261 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.07■□□□□ 0.16
GRIA1P42261 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.07■□□□□ 0.16
GRIA1P42261 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
GRIA1P42261 AC026150.2-201ENST00000564693 1156 ntBASIC16.07■□□□□ 0.16
GRIA1P42261 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GRIA1P42261 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GRIA1P42261 AC026979.3-201ENST00000607315 403 ntBASIC16.07■□□□□ 0.16
GRIA1P42261 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.07■□□□□ 0.16
GRIA1P42261 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
GRIA1P42261 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GRIA1P42261 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
GRIA1P42261 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GRIA1P42261 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
GRIA1P42261 FER1L4-210ENST00000615531 5998 ntBASIC16.07■□□□□ 0.16
GRIA1P42261 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GRIA1P42261 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GRIA1P42261 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GRIA1P42261 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GRIA1P42261 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
GRIA1P42261 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
GRIA1P42261 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
GRIA1P42261 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GRIA1P42261 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.06■□□□□ 0.16
GRIA1P42261 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.06■□□□□ 0.16
GRIA1P42261 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GRIA1P42261 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
GRIA1P42261 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.06■□□□□ 0.16
GRIA1P42261 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GRIA1P42261 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.06■□□□□ 0.16
GRIA1P42261 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.06■□□□□ 0.16
GRIA1P42261 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GRIA1P42261 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
GRIA1P42261 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GRIA1P42261 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GRIA1P42261 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
GRIA1P42261 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GRIA1P42261 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GRIA1P42261 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
GRIA1P42261 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GRIA1P42261 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.06■□□□□ 0.16
GRIA1P42261 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GRIA1P42261 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
GRIA1P42261 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
GRIA1P42261 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GRIA1P42261 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GRIA1P42261 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GRIA1P42261 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
GRIA1P42261 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GRIA1P42261 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
GRIA1P42261 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GRIA1P42261 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.06■□□□□ 0.16
GRIA1P42261 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.06■□□□□ 0.16
GRIA1P42261 HIST3H2BA-201ENST00000436555 524 ntBASIC16.06■□□□□ 0.16
GRIA1P42261 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.06■□□□□ 0.16
GRIA1P42261 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.06■□□□□ 0.16
GRIA1P42261 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.06■□□□□ 0.16
GRIA1P42261 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.06■□□□□ 0.16
GRIA1P42261 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.06■□□□□ 0.16
GRIA1P42261 AL133215.2-201ENST00000609242 977 ntBASIC16.06■□□□□ 0.16
GRIA1P42261 AC003101.2-201ENST00000612557 442 ntBASIC16.06■□□□□ 0.16
GRIA1P42261 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GRIA1P42261 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GRIA1P42261 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
GRIA1P42261 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GRIA1P42261 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GRIA1P42261 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.06■□□□□ 0.16
GRIA1P42261 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GRIA1P42261 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms