Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFC5P40937 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFC5P40937 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RFC5P40937 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFC5P40937 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
RFC5P40937 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFC5P40937 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.45■□□□□ 0.38
RFC5P40937 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFC5P40937 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFC5P40937 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RFC5P40937 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFC5P40937 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFC5P40937 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFC5P40937 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFC5P40937 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.45■□□□□ 0.38
RFC5P40937 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.45■□□□□ 0.38
RFC5P40937 KRT18P43-201ENST00000469825 1281 ntBASIC17.45■□□□□ 0.38
RFC5P40937 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.45■□□□□ 0.38
RFC5P40937 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.45■□□□□ 0.38
RFC5P40937 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.45■□□□□ 0.38
RFC5P40937 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.45■□□□□ 0.38
RFC5P40937 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.45■□□□□ 0.38
RFC5P40937 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.45■□□□□ 0.38
RFC5P40937 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.45■□□□□ 0.38
RFC5P40937 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.45■□□□□ 0.38
RFC5P40937 TMEM261P1-201ENST00000604899 340 ntBASIC17.45■□□□□ 0.38
RFC5P40937 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
RFC5P40937 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFC5P40937 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFC5P40937 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RFC5P40937 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFC5P40937 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFC5P40937 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFC5P40937 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFC5P40937 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.45■□□□□ 0.38
RFC5P40937 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFC5P40937 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFC5P40937 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFC5P40937 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.45■□□□□ 0.38
RFC5P40937 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFC5P40937 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFC5P40937 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RFC5P40937 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFC5P40937 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFC5P40937 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RFC5P40937 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFC5P40937 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFC5P40937 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFC5P40937 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFC5P40937 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RFC5P40937 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.44■□□□□ 0.38
RFC5P40937 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFC5P40937 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RFC5P40937 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RFC5P40937 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFC5P40937 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFC5P40937 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RFC5P40937 AP006294.1-201ENST00000415407 339 ntBASIC17.44■□□□□ 0.38
RFC5P40937 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFC5P40937 GAPDHP21-201ENST00000450301 1010 ntBASIC17.44■□□□□ 0.38
RFC5P40937 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.44■□□□□ 0.38
RFC5P40937 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.44■□□□□ 0.38
RFC5P40937 CR383656.12-201ENST00000549567 513 ntBASIC17.44■□□□□ 0.38
RFC5P40937 WASH4P-201ENST00000564273 1246 ntBASIC17.44■□□□□ 0.38
RFC5P40937 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.44■□□□□ 0.38
RFC5P40937 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RFC5P40937 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RFC5P40937 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.44■□□□□ 0.38
RFC5P40937 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.44■□□□□ 0.38
RFC5P40937 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.44■□□□□ 0.38
RFC5P40937 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.44■□□□□ 0.38
RFC5P40937 CU639417.3-201ENST00000624240 1404 ntBASIC17.44■□□□□ 0.38
RFC5P40937 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.44■□□□□ 0.38
RFC5P40937 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.44■□□□□ 0.38
RFC5P40937 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RFC5P40937 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.44■□□□□ 0.38
RFC5P40937 CLK3P2-201ENST00000427566 1453 ntBASIC17.44■□□□□ 0.38
RFC5P40937 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFC5P40937 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RFC5P40937 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RFC5P40937 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.43■□□□□ 0.38
RFC5P40937 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFC5P40937 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFC5P40937 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.43■□□□□ 0.38
RFC5P40937 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.43■□□□□ 0.38
RFC5P40937 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
RFC5P40937 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFC5P40937 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFC5P40937 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RFC5P40937 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFC5P40937 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.43■□□□□ 0.38
RFC5P40937 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.43■□□□□ 0.38
RFC5P40937 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFC5P40937 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.43■□□□□ 0.38
RFC5P40937 COX5BP8-201ENST00000416911 349 ntBASIC17.43■□□□□ 0.38
RFC5P40937 AC098850.1-201ENST00000419919 790 ntBASIC17.43■□□□□ 0.38
RFC5P40937 NME2P1-201ENST00000426182 414 ntBASIC17.43■□□□□ 0.38
RFC5P40937 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.43■□□□□ 0.38
RFC5P40937 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.43■□□□□ 0.38
RFC5P40937 ELK1P1-201ENST00000485699 580 ntBASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms