Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 CDC14C-201ENST00000428251 1719 ntBASIC13□□□□□ -0.33
CEACAM3P40198 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
CEACAM3P40198 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CEACAM3P40198 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13□□□□□ -0.33
CEACAM3P40198 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13□□□□□ -0.33
CEACAM3P40198 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13□□□□□ -0.33
CEACAM3P40198 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13□□□□□ -0.33
CEACAM3P40198 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CEACAM3P40198 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CEACAM3P40198 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CEACAM3P40198 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC13□□□□□ -0.33
CEACAM3P40198 AC051619.7-201ENST00000568314 623 ntBASIC13□□□□□ -0.33
CEACAM3P40198 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13□□□□□ -0.33
CEACAM3P40198 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13□□□□□ -0.33
CEACAM3P40198 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13□□□□□ -0.33
CEACAM3P40198 AL158211.3-201ENST00000607385 239 ntBASIC13□□□□□ -0.33
CEACAM3P40198 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CEACAM3P40198 MIR6069-201ENST00000620069 79 ntBASIC13□□□□□ -0.33
CEACAM3P40198 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CEACAM3P40198 AC073592.8-201ENST00000624126 511 ntBASIC13□□□□□ -0.33
CEACAM3P40198 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CEACAM3P40198 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13□□□□□ -0.33
CEACAM3P40198 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CEACAM3P40198 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CEACAM3P40198 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13□□□□□ -0.33
CEACAM3P40198 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13□□□□□ -0.33
CEACAM3P40198 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC12.99□□□□□ -0.33
CEACAM3P40198 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CEACAM3P40198 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CEACAM3P40198 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CEACAM3P40198 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC12.99□□□□□ -0.33
CEACAM3P40198 AC099063.4-201ENST00000641099 1602 ntBASIC12.99□□□□□ -0.33
CEACAM3P40198 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
CEACAM3P40198 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CEACAM3P40198 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC12.99□□□□□ -0.33
CEACAM3P40198 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CEACAM3P40198 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC12.99□□□□□ -0.33
CEACAM3P40198 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CEACAM3P40198 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CEACAM3P40198 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CEACAM3P40198 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CEACAM3P40198 KRT8P12-202ENST00000472924 1397 ntBASIC12.99□□□□□ -0.33
CEACAM3P40198 FO538757.1-201ENST00000623083 1397 ntBASIC12.99□□□□□ -0.33
CEACAM3P40198 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC12.99□□□□□ -0.33
CEACAM3P40198 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CEACAM3P40198 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CEACAM3P40198 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CEACAM3P40198 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CEACAM3P40198 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CEACAM3P40198 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CEACAM3P40198 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CEACAM3P40198 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.99□□□□□ -0.33
CEACAM3P40198 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.99□□□□□ -0.33
CEACAM3P40198 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC12.99□□□□□ -0.33
CEACAM3P40198 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC12.99□□□□□ -0.33
CEACAM3P40198 SATB1-217ENST00000493952 626 ntTSL 3 BASIC12.99□□□□□ -0.33
CEACAM3P40198 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC12.99□□□□□ -0.33
CEACAM3P40198 IGHV3-42-201ENST00000520410 361 ntBASIC12.99□□□□□ -0.33
CEACAM3P40198 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC12.99□□□□□ -0.33
CEACAM3P40198 AL079307.3-201ENST00000556114 283 ntBASIC12.99□□□□□ -0.33
CEACAM3P40198 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC12.99□□□□□ -0.33
CEACAM3P40198 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CEACAM3P40198 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
CEACAM3P40198 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CEACAM3P40198 BLK-205ENST00000529894 2017 ntTSL 5 BASIC12.99□□□□□ -0.33
CEACAM3P40198 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CEACAM3P40198 AC134407.2-201ENST00000625089 1978 ntBASIC12.99□□□□□ -0.33
CEACAM3P40198 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CEACAM3P40198 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CEACAM3P40198 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CEACAM3P40198 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CEACAM3P40198 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CEACAM3P40198 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CEACAM3P40198 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CEACAM3P40198 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC12.99□□□□□ -0.33
CEACAM3P40198 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CEACAM3P40198 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
CEACAM3P40198 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CEACAM3P40198 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CEACAM3P40198 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CEACAM3P40198 AL136982.4-201ENST00000437689 1740 ntBASIC12.99□□□□□ -0.33
CEACAM3P40198 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CEACAM3P40198 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CEACAM3P40198 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CEACAM3P40198 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CEACAM3P40198 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC12.98□□□□□ -0.33
CEACAM3P40198 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CEACAM3P40198 BNIP3P1-202ENST00000550043 1585 ntBASIC12.98□□□□□ -0.33
CEACAM3P40198 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CEACAM3P40198 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.98□□□□□ -0.33
CEACAM3P40198 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
CEACAM3P40198 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
CEACAM3P40198 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CEACAM3P40198 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CEACAM3P40198 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CEACAM3P40198 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC12.98□□□□□ -0.33
CEACAM3P40198 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CEACAM3P40198 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.98□□□□□ -0.33
CEACAM3P40198 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CEACAM3P40198 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms