Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.7■□□□□ 0.26
GRIK1P39086 AC097359.3-201ENST00000603982 1210 ntBASIC16.7■□□□□ 0.26
GRIK1P39086 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.7■□□□□ 0.26
GRIK1P39086 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
GRIK1P39086 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIK1P39086 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIK1P39086 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.7■□□□□ 0.26
GRIK1P39086 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIK1P39086 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.7■□□□□ 0.26
GRIK1P39086 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
GRIK1P39086 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
GRIK1P39086 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
GRIK1P39086 AC063926.2-201ENST00000623766 1308 ntBASIC16.7■□□□□ 0.26
GRIK1P39086 LINC02199-201ENST00000506655 2702 ntBASIC16.69■□□□□ 0.26
GRIK1P39086 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GRIK1P39086 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GRIK1P39086 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
GRIK1P39086 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GRIK1P39086 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.69■□□□□ 0.26
GRIK1P39086 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GRIK1P39086 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
GRIK1P39086 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GRIK1P39086 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
GRIK1P39086 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GRIK1P39086 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GRIK1P39086 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GRIK1P39086 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GRIK1P39086 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GRIK1P39086 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GRIK1P39086 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.69■□□□□ 0.26
GRIK1P39086 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.69■□□□□ 0.26
GRIK1P39086 KRT18P64-201ENST00000434946 1219 ntBASIC16.69■□□□□ 0.26
GRIK1P39086 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
GRIK1P39086 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
GRIK1P39086 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.69■□□□□ 0.26
GRIK1P39086 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.69■□□□□ 0.26
GRIK1P39086 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.69■□□□□ 0.26
GRIK1P39086 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.69■□□□□ 0.26
GRIK1P39086 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.69■□□□□ 0.26
GRIK1P39086 AC099568.2-201ENST00000609194 695 ntBASIC16.69■□□□□ 0.26
GRIK1P39086 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GRIK1P39086 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
GRIK1P39086 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.69■□□□□ 0.26
GRIK1P39086 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GRIK1P39086 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
GRIK1P39086 MST1L-201ENST00000442552 2185 ntBASIC16.69■□□□□ 0.26
GRIK1P39086 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.69■□□□□ 0.26
GRIK1P39086 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
GRIK1P39086 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GRIK1P39086 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GRIK1P39086 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GRIK1P39086 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GRIK1P39086 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
GRIK1P39086 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
GRIK1P39086 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GRIK1P39086 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.69■□□□□ 0.26
GRIK1P39086 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GRIK1P39086 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
GRIK1P39086 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GRIK1P39086 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GRIK1P39086 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GRIK1P39086 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GRIK1P39086 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.68■□□□□ 0.26
GRIK1P39086 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GRIK1P39086 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
GRIK1P39086 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
GRIK1P39086 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GRIK1P39086 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.68■□□□□ 0.26
GRIK1P39086 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
GRIK1P39086 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.68■□□□□ 0.26
GRIK1P39086 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.68■□□□□ 0.26
GRIK1P39086 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
GRIK1P39086 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.68■□□□□ 0.26
GRIK1P39086 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.68■□□□□ 0.26
GRIK1P39086 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
GRIK1P39086 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GRIK1P39086 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.68■□□□□ 0.26
GRIK1P39086 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.68■□□□□ 0.26
GRIK1P39086 SLED1-202ENST00000512051 380 ntBASIC16.68■□□□□ 0.26
GRIK1P39086 AC104596.2-201ENST00000512793 793 ntBASIC16.68■□□□□ 0.26
GRIK1P39086 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.68■□□□□ 0.26
GRIK1P39086 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
GRIK1P39086 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.68■□□□□ 0.26
GRIK1P39086 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.68■□□□□ 0.26
GRIK1P39086 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GRIK1P39086 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.68■□□□□ 0.26
GRIK1P39086 AC093726.1-201ENST00000608064 963 ntBASIC16.68■□□□□ 0.26
GRIK1P39086 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.68■□□□□ 0.26
GRIK1P39086 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.68■□□□□ 0.26
GRIK1P39086 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.68■□□□□ 0.26
GRIK1P39086 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.68■□□□□ 0.26
GRIK1P39086 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GRIK1P39086 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GRIK1P39086 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
GRIK1P39086 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
GRIK1P39086 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.68■□□□□ 0.26
GRIK1P39086 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
GRIK1P39086 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
GRIK1P39086 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GRIK1P39086 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms