Protein–RNA interactions for Protein: P36544

CHRNA7, Neuronal acetylcholine receptor subunit alpha-7, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7P36544 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHRNA7P36544 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.08□□□□□ -0.32
CHRNA7P36544 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.08□□□□□ -0.32
CHRNA7P36544 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHRNA7P36544 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHRNA7P36544 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.08□□□□□ -0.32
CHRNA7P36544 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.08□□□□□ -0.32
CHRNA7P36544 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CHRNA7P36544 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHRNA7P36544 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHRNA7P36544 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CHRNA7P36544 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.08□□□□□ -0.32
CHRNA7P36544 SNX18-202ENST00000343017 3140 ntBASIC13.08□□□□□ -0.32
CHRNA7P36544 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.08□□□□□ -0.32
CHRNA7P36544 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
CHRNA7P36544 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.32
CHRNA7P36544 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.08□□□□□ -0.32
CHRNA7P36544 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHRNA7P36544 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHRNA7P36544 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.08□□□□□ -0.32
CHRNA7P36544 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.08□□□□□ -0.32
CHRNA7P36544 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHRNA7P36544 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHRNA7P36544 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CHRNA7P36544 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHRNA7P36544 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CHRNA7P36544 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.07□□□□□ -0.32
CHRNA7P36544 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CHRNA7P36544 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.07□□□□□ -0.32
CHRNA7P36544 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHRNA7P36544 FAM45BP-202ENST00000592932 1624 ntBASIC13.07□□□□□ -0.32
CHRNA7P36544 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.07□□□□□ -0.32
CHRNA7P36544 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.07□□□□□ -0.32
CHRNA7P36544 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHRNA7P36544 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.07□□□□□ -0.32
CHRNA7P36544 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHRNA7P36544 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHRNA7P36544 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CHRNA7P36544 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CHRNA7P36544 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHRNA7P36544 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CHRNA7P36544 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHRNA7P36544 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
CHRNA7P36544 YBX2P1-201ENST00000394192 760 ntBASIC13.07□□□□□ -0.32
CHRNA7P36544 AC002056.1-201ENST00000395613 760 ntBASIC13.07□□□□□ -0.32
CHRNA7P36544 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CHRNA7P36544 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.07□□□□□ -0.32
CHRNA7P36544 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.07□□□□□ -0.32
CHRNA7P36544 AL078644.1-201ENST00000609881 752 ntBASIC13.07□□□□□ -0.32
CHRNA7P36544 AC091812.2-201ENST00000619081 385 ntBASIC13.07□□□□□ -0.32
CHRNA7P36544 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.07□□□□□ -0.32
CHRNA7P36544 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CHRNA7P36544 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CHRNA7P36544 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHRNA7P36544 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CHRNA7P36544 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHRNA7P36544 AP005117.1-202ENST00000581724 1908 ntBASIC13.07□□□□□ -0.32
CHRNA7P36544 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CHRNA7P36544 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHRNA7P36544 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.07□□□□□ -0.32
CHRNA7P36544 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CHRNA7P36544 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHRNA7P36544 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CHRNA7P36544 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
CHRNA7P36544 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
CHRNA7P36544 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.07□□□□□ -0.32
CHRNA7P36544 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHRNA7P36544 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.06□□□□□ -0.32
CHRNA7P36544 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHRNA7P36544 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHRNA7P36544 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.06□□□□□ -0.32
CHRNA7P36544 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CHRNA7P36544 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
CHRNA7P36544 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CHRNA7P36544 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHRNA7P36544 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CHRNA7P36544 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHRNA7P36544 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHRNA7P36544 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHRNA7P36544 AC069224.1-201ENST00000566372 1715 ntBASIC13.06□□□□□ -0.32
CHRNA7P36544 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.06□□□□□ -0.32
CHRNA7P36544 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHRNA7P36544 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHRNA7P36544 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHRNA7P36544 MCCD1P2-201ENST00000423228 335 ntBASIC13.06□□□□□ -0.32
CHRNA7P36544 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.06□□□□□ -0.32
CHRNA7P36544 COX10-202ENST00000429152 875 ntTSL 2 BASIC13.06□□□□□ -0.32
CHRNA7P36544 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHRNA7P36544 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.06□□□□□ -0.32
CHRNA7P36544 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CHRNA7P36544 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHRNA7P36544 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CHRNA7P36544 MIR3687-2-201ENST00000577708 61 ntBASIC13.06□□□□□ -0.32
CHRNA7P36544 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.06□□□□□ -0.32
CHRNA7P36544 MIR3687-1-201ENST00000614492 61 ntBASIC13.06□□□□□ -0.32
CHRNA7P36544 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CHRNA7P36544 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
CHRNA7P36544 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.06□□□□□ -0.32
CHRNA7P36544 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CHRNA7P36544 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms