Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTNNA1P35221 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.81■□□□□ 0.28
CTNNA1P35221 TPM4P1-201ENST00000436100 807 ntBASIC16.81■□□□□ 0.28
CTNNA1P35221 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CTNNA1P35221 RPL13AP23-201ENST00000480739 586 ntBASIC16.81■□□□□ 0.28
CTNNA1P35221 AC105233.2-201ENST00000523697 349 ntBASIC16.81■□□□□ 0.28
CTNNA1P35221 AF228730.5-201ENST00000530288 346 ntBASIC16.81■□□□□ 0.28
CTNNA1P35221 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.81■□□□□ 0.28
CTNNA1P35221 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.81■□□□□ 0.28
CTNNA1P35221 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.81■□□□□ 0.28
CTNNA1P35221 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.81■□□□□ 0.28
CTNNA1P35221 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.81■□□□□ 0.28
CTNNA1P35221 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.81■□□□□ 0.28
CTNNA1P35221 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.81■□□□□ 0.28
CTNNA1P35221 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.81■□□□□ 0.28
CTNNA1P35221 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CTNNA1P35221 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTNNA1P35221 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.81■□□□□ 0.28
CTNNA1P35221 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.81■□□□□ 0.28
CTNNA1P35221 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTNNA1P35221 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.81■□□□□ 0.28
CTNNA1P35221 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CTNNA1P35221 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTNNA1P35221 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.81■□□□□ 0.28
CTNNA1P35221 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTNNA1P35221 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.8■□□□□ 0.28
CTNNA1P35221 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTNNA1P35221 MIR600HG-201ENST00000449175 5984 ntBASIC16.8■□□□□ 0.28
CTNNA1P35221 AC092127.1-201ENST00000567093 3455 ntBASIC16.8■□□□□ 0.28
CTNNA1P35221 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTNNA1P35221 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTNNA1P35221 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTNNA1P35221 AL691432.1-201ENST00000596308 1422 ntBASIC16.8■□□□□ 0.28
CTNNA1P35221 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CTNNA1P35221 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTNNA1P35221 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CTNNA1P35221 CICP24-201ENST00000605464 2705 ntBASIC16.8■□□□□ 0.28
CTNNA1P35221 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTNNA1P35221 SNX18-202ENST00000343017 3140 ntBASIC16.8■□□□□ 0.28
CTNNA1P35221 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.8■□□□□ 0.28
CTNNA1P35221 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTNNA1P35221 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTNNA1P35221 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.8■□□□□ 0.28
CTNNA1P35221 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTNNA1P35221 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.8■□□□□ 0.28
CTNNA1P35221 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.8■□□□□ 0.28
CTNNA1P35221 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.8■□□□□ 0.28
CTNNA1P35221 AC243562.2-201ENST00000561247 970 ntBASIC16.8■□□□□ 0.28
CTNNA1P35221 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTNNA1P35221 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.8■□□□□ 0.28
CTNNA1P35221 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.8■□□□□ 0.28
CTNNA1P35221 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.8■□□□□ 0.28
CTNNA1P35221 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.8■□□□□ 0.28
CTNNA1P35221 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.8■□□□□ 0.28
CTNNA1P35221 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTNNA1P35221 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.8■□□□□ 0.28
CTNNA1P35221 SPTSSB-204ENST00000617024 1292 ntBASIC16.8■□□□□ 0.28
CTNNA1P35221 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTNNA1P35221 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTNNA1P35221 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
CTNNA1P35221 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.8■□□□□ 0.28
CTNNA1P35221 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
CTNNA1P35221 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CTNNA1P35221 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.8■□□□□ 0.28
CTNNA1P35221 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.8■□□□□ 0.28
CTNNA1P35221 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.8■□□□□ 0.28
CTNNA1P35221 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CTNNA1P35221 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.8■□□□□ 0.28
CTNNA1P35221 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.8■□□□□ 0.28
CTNNA1P35221 AC106881.1-201ENST00000605849 3329 ntBASIC16.8■□□□□ 0.28
CTNNA1P35221 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.8■□□□□ 0.28
CTNNA1P35221 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTNNA1P35221 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CTNNA1P35221 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTNNA1P35221 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.79■□□□□ 0.28
CTNNA1P35221 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTNNA1P35221 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.79■□□□□ 0.28
CTNNA1P35221 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.79■□□□□ 0.28
CTNNA1P35221 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTNNA1P35221 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.79■□□□□ 0.28
CTNNA1P35221 IL9RP2-201ENST00000423948 1312 ntBASIC16.79■□□□□ 0.28
CTNNA1P35221 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CTNNA1P35221 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTNNA1P35221 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.79■□□□□ 0.28
CTNNA1P35221 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
CTNNA1P35221 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.79■□□□□ 0.28
CTNNA1P35221 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
CTNNA1P35221 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.79■□□□□ 0.28
CTNNA1P35221 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.79■□□□□ 0.28
CTNNA1P35221 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.79■□□□□ 0.28
CTNNA1P35221 AC024267.1-201ENST00000582320 895 ntBASIC16.79■□□□□ 0.28
CTNNA1P35221 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.79■□□□□ 0.28
CTNNA1P35221 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.79■□□□□ 0.28
CTNNA1P35221 AC092865.6-201ENST00000642101 219 ntBASIC16.79■□□□□ 0.28
CTNNA1P35221 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CTNNA1P35221 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTNNA1P35221 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTNNA1P35221 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CTNNA1P35221 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CTNNA1P35221 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms