Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
HOXC13P31276 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
HOXC13P31276 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC13P31276 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC13P31276 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC13P31276 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
HOXC13P31276 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.32■□□□□ 0.2
HOXC13P31276 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC13P31276 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
HOXC13P31276 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC13P31276 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HOXC13P31276 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC13P31276 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.32■□□□□ 0.2
HOXC13P31276 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC13P31276 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.32■□□□□ 0.2
HOXC13P31276 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC13P31276 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.32■□□□□ 0.2
HOXC13P31276 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.32■□□□□ 0.2
HOXC13P31276 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HOXC13P31276 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.32■□□□□ 0.2
HOXC13P31276 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC13P31276 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC13P31276 AC074044.1-201ENST00000609673 707 ntBASIC16.32■□□□□ 0.2
HOXC13P31276 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.32■□□□□ 0.2
HOXC13P31276 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.32■□□□□ 0.2
HOXC13P31276 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.32■□□□□ 0.2
HOXC13P31276 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC13P31276 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC13P31276 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.32■□□□□ 0.2
HOXC13P31276 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC13P31276 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC13P31276 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.31■□□□□ 0.2
HOXC13P31276 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.31■□□□□ 0.2
HOXC13P31276 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC13P31276 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HOXC13P31276 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC13P31276 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HOXC13P31276 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.31■□□□□ 0.2
HOXC13P31276 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HOXC13P31276 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC13P31276 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC13P31276 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC13P31276 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC13P31276 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.31■□□□□ 0.2
HOXC13P31276 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC13P31276 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC13P31276 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC13P31276 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.31■□□□□ 0.2
HOXC13P31276 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
HOXC13P31276 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HOXC13P31276 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.31■□□□□ 0.2
HOXC13P31276 RPL13P2-201ENST00000440687 659 ntBASIC16.31■□□□□ 0.2
HOXC13P31276 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.31■□□□□ 0.2
HOXC13P31276 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.31■□□□□ 0.2
HOXC13P31276 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC13P31276 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.31■□□□□ 0.2
HOXC13P31276 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.31■□□□□ 0.2
HOXC13P31276 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.31■□□□□ 0.2
HOXC13P31276 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.31■□□□□ 0.2
HOXC13P31276 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.31■□□□□ 0.2
HOXC13P31276 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.31■□□□□ 0.2
HOXC13P31276 AC084346.2-201ENST00000607097 949 ntBASIC16.31■□□□□ 0.2
HOXC13P31276 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC13P31276 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC13P31276 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC13P31276 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC13P31276 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.31■□□□□ 0.2
HOXC13P31276 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HOXC13P31276 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
HOXC13P31276 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC13P31276 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC13P31276 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC13P31276 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.31■□□□□ 0.2
HOXC13P31276 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC13P31276 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HOXC13P31276 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC13P31276 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC13P31276 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HOXC13P31276 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC13P31276 CLK3P2-201ENST00000427566 1453 ntBASIC16.3■□□□□ 0.2
HOXC13P31276 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
HOXC13P31276 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC13P31276 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC13P31276 AC093525.8-201ENST00000624099 1342 ntBASIC16.3■□□□□ 0.2
HOXC13P31276 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.3■□□□□ 0.2
HOXC13P31276 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.3■□□□□ 0.2
HOXC13P31276 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.3■□□□□ 0.2
HOXC13P31276 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.3■□□□□ 0.2
HOXC13P31276 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.3■□□□□ 0.2
HOXC13P31276 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.3■□□□□ 0.2
HOXC13P31276 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.3■□□□□ 0.2
HOXC13P31276 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC13P31276 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.3■□□□□ 0.2
HOXC13P31276 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HOXC13P31276 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.3■□□□□ 0.2
HOXC13P31276 AC093726.1-201ENST00000608064 963 ntBASIC16.3■□□□□ 0.2
HOXC13P31276 AC099568.2-201ENST00000609194 695 ntBASIC16.3■□□□□ 0.2
HOXC13P31276 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.3■□□□□ 0.2
HOXC13P31276 AL033527.5-201ENST00000641382 801 ntBASIC16.3■□□□□ 0.2
HOXC13P31276 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms