Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC18.58■□□□□ 0.57
COL4A5P29400 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL4A5P29400 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL4A5P29400 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL4A5P29400 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
COL4A5P29400 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
COL4A5P29400 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC18.58■□□□□ 0.57
COL4A5P29400 LBH-202ENST00000401506 485 ntTSL 3 BASIC18.58■□□□□ 0.57
COL4A5P29400 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL4A5P29400 PDIA3P2-201ENST00000428073 158 ntBASIC18.58■□□□□ 0.57
COL4A5P29400 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC18.58■□□□□ 0.57
COL4A5P29400 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL4A5P29400 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.58■□□□□ 0.57
COL4A5P29400 MAGEA5-201ENST00000446757 942 ntBASIC18.58■□□□□ 0.57
COL4A5P29400 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC18.58■□□□□ 0.57
COL4A5P29400 BNIP3P13-201ENST00000599968 566 ntBASIC18.58■□□□□ 0.57
COL4A5P29400 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL4A5P29400 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL4A5P29400 AC022211.2-201ENST00000585075 2527 ntBASIC18.58■□□□□ 0.56
COL4A5P29400 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL4A5P29400 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COL4A5P29400 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.58■□□□□ 0.56
COL4A5P29400 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL4A5P29400 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL4A5P29400 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL4A5P29400 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
COL4A5P29400 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL4A5P29400 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL4A5P29400 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
COL4A5P29400 FZD10-202ENST00000539839 3282 ntBASIC18.57■□□□□ 0.56
COL4A5P29400 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.57■□□□□ 0.56
COL4A5P29400 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL4A5P29400 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL4A5P29400 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC18.57■□□□□ 0.56
COL4A5P29400 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC18.57■□□□□ 0.56
COL4A5P29400 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC18.57■□□□□ 0.56
COL4A5P29400 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC18.57■□□□□ 0.56
COL4A5P29400 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC18.57■□□□□ 0.56
COL4A5P29400 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
COL4A5P29400 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL4A5P29400 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.57■□□□□ 0.56
COL4A5P29400 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL4A5P29400 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
COL4A5P29400 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.57■□□□□ 0.56
COL4A5P29400 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL4A5P29400 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL4A5P29400 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL4A5P29400 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL4A5P29400 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
COL4A5P29400 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL4A5P29400 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
COL4A5P29400 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
COL4A5P29400 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
COL4A5P29400 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL4A5P29400 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.57■□□□□ 0.56
COL4A5P29400 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
COL4A5P29400 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL4A5P29400 NPPA-201ENST00000376476 728 ntTSL 3 BASIC18.57■□□□□ 0.56
COL4A5P29400 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL4A5P29400 AL136309.1-201ENST00000403917 691 ntBASIC18.57■□□□□ 0.56
COL4A5P29400 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL4A5P29400 AC234782.1-201ENST00000451950 919 ntBASIC18.57■□□□□ 0.56
COL4A5P29400 AC012618.1-201ENST00000461223 412 ntBASIC18.57■□□□□ 0.56
COL4A5P29400 AC104784.1-201ENST00000473096 294 ntBASIC18.57■□□□□ 0.56
COL4A5P29400 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC18.57■□□□□ 0.56
COL4A5P29400 PCBP2-OT1-201ENST00000634357 590 ntBASIC18.57■□□□□ 0.56
COL4A5P29400 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL4A5P29400 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL4A5P29400 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COL4A5P29400 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL4A5P29400 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
COL4A5P29400 CLUHP2-201ENST00000426660 1303 ntBASIC18.56■□□□□ 0.56
COL4A5P29400 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COL4A5P29400 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
COL4A5P29400 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL4A5P29400 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
COL4A5P29400 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL4A5P29400 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL4A5P29400 RPS15-201ENST00000233609 534 ntTSL 2 BASIC18.56■□□□□ 0.56
COL4A5P29400 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC18.56■□□□□ 0.56
COL4A5P29400 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC18.56■□□□□ 0.56
COL4A5P29400 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC18.56■□□□□ 0.56
COL4A5P29400 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COL4A5P29400 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL4A5P29400 MIR3147-201ENST00000577811 66 ntBASIC18.56■□□□□ 0.56
COL4A5P29400 RPS15-205ENST00000586686 562 ntTSL 5 BASIC18.56■□□□□ 0.56
COL4A5P29400 RPS15-208ENST00000591804 711 ntTSL 5 BASIC18.56■□□□□ 0.56
COL4A5P29400 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL4A5P29400 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC18.56■□□□□ 0.56
COL4A5P29400 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC18.56■□□□□ 0.56
COL4A5P29400 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COL4A5P29400 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
COL4A5P29400 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
COL4A5P29400 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL4A5P29400 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL4A5P29400 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL4A5P29400 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COL4A5P29400 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL4A5P29400 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.55■□□□□ 0.56
COL4A5P29400 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms