Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN6P29350 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
PTPN6P29350 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.07■□□□□ 0
PTPN6P29350 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN6P29350 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN6P29350 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.07■□□□□ 0
PTPN6P29350 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
PTPN6P29350 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN6P29350 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN6P29350 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
PTPN6P29350 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN6P29350 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN6P29350 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.07■□□□□ 0
PTPN6P29350 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.07■□□□□ 0
PTPN6P29350 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.07■□□□□ 0
PTPN6P29350 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN6P29350 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN6P29350 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN6P29350 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN6P29350 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN6P29350 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN6P29350 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.07■□□□□ 0
PTPN6P29350 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN6P29350 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN6P29350 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.07■□□□□ 0
PTPN6P29350 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.07■□□□□ 0
PTPN6P29350 AC142381.1-201ENST00000426099 345 ntBASIC15.07■□□□□ 0
PTPN6P29350 AC005237.2-201ENST00000434368 219 ntBASIC15.07■□□□□ 0
PTPN6P29350 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.07■□□□□ 0
PTPN6P29350 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.07■□□□□ 0
PTPN6P29350 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.07■□□□□ 0
PTPN6P29350 AC023141.5-201ENST00000458585 616 ntBASIC15.07■□□□□ 0
PTPN6P29350 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.07■□□□□ 0
PTPN6P29350 AC069335.1-201ENST00000489972 472 ntBASIC15.07■□□□□ 0
PTPN6P29350 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.07■□□□□ 0
PTPN6P29350 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.07■□□□□ 0
PTPN6P29350 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN6P29350 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.07■□□□□ 0
PTPN6P29350 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
PTPN6P29350 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.07■□□□□ 0
PTPN6P29350 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
PTPN6P29350 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.07■□□□□ 0
PTPN6P29350 AC093520.2-201ENST00000561830 333 ntBASIC15.07■□□□□ 0
PTPN6P29350 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.07■□□□□ 0
PTPN6P29350 LINC01225-203ENST00000563550 1244 ntBASIC15.07■□□□□ 0
PTPN6P29350 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN6P29350 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.07■□□□□ 0
PTPN6P29350 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.07■□□□□ 0
PTPN6P29350 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.07■□□□□ 0
PTPN6P29350 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.07■□□□□ 0
PTPN6P29350 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.07■□□□□ 0
PTPN6P29350 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.07■□□□□ 0
PTPN6P29350 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.07■□□□□ 0
PTPN6P29350 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
PTPN6P29350 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN6P29350 KRT18P28-201ENST00000453838 1332 ntBASIC15.07■□□□□ 0
PTPN6P29350 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.07■□□□□ 0
PTPN6P29350 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN6P29350 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.07■□□□□ 0
PTPN6P29350 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN6P29350 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.07■□□□□ 0
PTPN6P29350 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
PTPN6P29350 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN6P29350 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
PTPN6P29350 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN6P29350 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.07■□□□□ 0
PTPN6P29350 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN6P29350 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.07■□□□□ 0
PTPN6P29350 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN6P29350 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN6P29350 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.06■□□□□ 0
PTPN6P29350 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
PTPN6P29350 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
PTPN6P29350 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
PTPN6P29350 AL136982.4-201ENST00000437689 1740 ntBASIC15.06■□□□□ 0
PTPN6P29350 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
PTPN6P29350 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.06■□□□□ 0
PTPN6P29350 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.06■□□□□ 0
PTPN6P29350 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PTPN6P29350 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
PTPN6P29350 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.06■□□□□ 0
PTPN6P29350 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.06■□□□□ 0
PTPN6P29350 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
PTPN6P29350 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PTPN6P29350 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.06■□□□□ 0
PTPN6P29350 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.06■□□□□ 0
PTPN6P29350 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.06■□□□□ 0
PTPN6P29350 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.06■□□□□ 0
PTPN6P29350 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.06■□□□□ 0
PTPN6P29350 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.06■□□□□ 0
PTPN6P29350 IGHV3-62-201ENST00000520057 340 ntBASIC15.06■□□□□ 0
PTPN6P29350 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.06■□□□□ 0
PTPN6P29350 KRT8P23-201ENST00000560090 1207 ntBASIC15.06■□□□□ 0
PTPN6P29350 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.06■□□□□ 0
PTPN6P29350 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.06■□□□□ 0
PTPN6P29350 AC024267.1-201ENST00000582320 895 ntBASIC15.06■□□□□ 0
PTPN6P29350 AC008267.7-201ENST00000624570 1194 ntBASIC15.06■□□□□ 0
PTPN6P29350 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.06■□□□□ 0
PTPN6P29350 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.06■□□□□ 0
PTPN6P29350 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms