Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
ERCC3P19447 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
ERCC3P19447 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.37■□□□□ 0.53
ERCC3P19447 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
ERCC3P19447 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERCC3P19447 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERCC3P19447 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
ERCC3P19447 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERCC3P19447 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.36■□□□□ 0.53
ERCC3P19447 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERCC3P19447 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERCC3P19447 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERCC3P19447 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERCC3P19447 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERCC3P19447 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERCC3P19447 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERCC3P19447 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
ERCC3P19447 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC18.36■□□□□ 0.53
ERCC3P19447 AC004987.2-201ENST00000395959 1148 ntBASIC18.36■□□□□ 0.53
ERCC3P19447 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERCC3P19447 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.36■□□□□ 0.53
ERCC3P19447 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.36■□□□□ 0.53
ERCC3P19447 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.36■□□□□ 0.53
ERCC3P19447 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERCC3P19447 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC18.36■□□□□ 0.53
ERCC3P19447 AC234783.1-201ENST00000441761 496 ntBASIC18.36■□□□□ 0.53
ERCC3P19447 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ERCC3P19447 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ERCC3P19447 AC022494.1-201ENST00000466044 728 ntBASIC18.36■□□□□ 0.53
ERCC3P19447 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.36■□□□□ 0.53
ERCC3P19447 RN7SL399P-201ENST00000471648 279 ntBASIC18.36■□□□□ 0.53
ERCC3P19447 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.36■□□□□ 0.53
ERCC3P19447 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.36■□□□□ 0.53
ERCC3P19447 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.36■□□□□ 0.53
ERCC3P19447 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.36■□□□□ 0.53
ERCC3P19447 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.36■□□□□ 0.53
ERCC3P19447 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.36■□□□□ 0.53
ERCC3P19447 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ERCC3P19447 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ERCC3P19447 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.36■□□□□ 0.53
ERCC3P19447 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
ERCC3P19447 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.36■□□□□ 0.53
ERCC3P19447 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.36■□□□□ 0.53
ERCC3P19447 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
ERCC3P19447 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERCC3P19447 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18.36■□□□□ 0.53
ERCC3P19447 AL391069.4-201ENST00000609583 481 ntBASIC18.36■□□□□ 0.53
ERCC3P19447 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
ERCC3P19447 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.36■□□□□ 0.53
ERCC3P19447 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERCC3P19447 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERCC3P19447 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERCC3P19447 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERCC3P19447 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ERCC3P19447 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ERCC3P19447 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ERCC3P19447 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ERCC3P19447 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.35■□□□□ 0.53
ERCC3P19447 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ERCC3P19447 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
ERCC3P19447 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC18.35■□□□□ 0.53
ERCC3P19447 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ERCC3P19447 PAUPAR-201ENST00000630360 2965 ntBASIC18.35■□□□□ 0.53
ERCC3P19447 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ERCC3P19447 PCDHA1-201ENST00000378133 2726 ntBASIC18.35■□□□□ 0.53
ERCC3P19447 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ERCC3P19447 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ERCC3P19447 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
ERCC3P19447 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ERCC3P19447 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
ERCC3P19447 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ERCC3P19447 AZGP1P1-201ENST00000411909 902 ntBASIC18.35■□□□□ 0.53
ERCC3P19447 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.35■□□□□ 0.53
ERCC3P19447 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ERCC3P19447 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.35■□□□□ 0.53
ERCC3P19447 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.35■□□□□ 0.53
ERCC3P19447 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.35■□□□□ 0.53
ERCC3P19447 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ERCC3P19447 AC010319.3-201ENST00000597028 470 ntBASIC18.35■□□□□ 0.53
ERCC3P19447 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
ERCC3P19447 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.35■□□□□ 0.53
ERCC3P19447 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
ERCC3P19447 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ERCC3P19447 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.35■□□□□ 0.53
ERCC3P19447 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.35■□□□□ 0.53
ERCC3P19447 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ERCC3P19447 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
ERCC3P19447 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ERCC3P19447 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ERCC3P19447 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.35■□□□□ 0.53
ERCC3P19447 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ERCC3P19447 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.35■□□□□ 0.53
ERCC3P19447 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
ERCC3P19447 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ERCC3P19447 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
ERCC3P19447 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ERCC3P19447 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
ERCC3P19447 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
ERCC3P19447 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ERCC3P19447 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms