Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRKCAP17252 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRKCAP17252 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRKCAP17252 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PRKCAP17252 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRKCAP17252 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.78□□□□□ -0.04
PRKCAP17252 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.78□□□□□ -0.04
PRKCAP17252 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PRKCAP17252 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.78□□□□□ -0.04
PRKCAP17252 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.78□□□□□ -0.04
PRKCAP17252 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRKCAP17252 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRKCAP17252 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRKCAP17252 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRKCAP17252 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.78□□□□□ -0.04
PRKCAP17252 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PRKCAP17252 KRT18P32-201ENST00000424695 1287 ntBASIC14.78□□□□□ -0.04
PRKCAP17252 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PRKCAP17252 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRKCAP17252 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PRKCAP17252 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
PRKCAP17252 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRKCAP17252 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.78□□□□□ -0.04
PRKCAP17252 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.78□□□□□ -0.04
PRKCAP17252 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRKCAP17252 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.78□□□□□ -0.04
PRKCAP17252 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
PRKCAP17252 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PRKCAP17252 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
PRKCAP17252 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PRKCAP17252 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.78□□□□□ -0.04
PRKCAP17252 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRKCAP17252 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.78□□□□□ -0.04
PRKCAP17252 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.78□□□□□ -0.04
PRKCAP17252 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRKCAP17252 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.78□□□□□ -0.04
PRKCAP17252 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PRKCAP17252 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.78□□□□□ -0.04
PRKCAP17252 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.78□□□□□ -0.04
PRKCAP17252 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PRKCAP17252 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PRKCAP17252 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PRKCAP17252 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PRKCAP17252 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.77□□□□□ -0.04
PRKCAP17252 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.77□□□□□ -0.04
PRKCAP17252 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
PRKCAP17252 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.77□□□□□ -0.04
PRKCAP17252 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PRKCAP17252 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PRKCAP17252 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
PRKCAP17252 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PRKCAP17252 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PRKCAP17252 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.77□□□□□ -0.04
PRKCAP17252 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.77□□□□□ -0.04
PRKCAP17252 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PRKCAP17252 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PRKCAP17252 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
PRKCAP17252 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PRKCAP17252 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PRKCAP17252 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.05
PRKCAP17252 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PRKCAP17252 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PRKCAP17252 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
PRKCAP17252 FAM220BP-201ENST00000377689 816 ntBASIC14.77□□□□□ -0.05
PRKCAP17252 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.77□□□□□ -0.05
PRKCAP17252 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.77□□□□□ -0.05
PRKCAP17252 CNN2P11-201ENST00000429351 262 ntBASIC14.77□□□□□ -0.05
PRKCAP17252 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PRKCAP17252 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
PRKCAP17252 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.77□□□□□ -0.05
PRKCAP17252 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PRKCAP17252 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
PRKCAP17252 SNHG9-202ENST00000564014 471 ntBASIC14.77□□□□□ -0.05
PRKCAP17252 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
PRKCAP17252 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
PRKCAP17252 AC139749.1-202ENST00000617529 3139 ntBASIC14.77□□□□□ -0.05
PRKCAP17252 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.77□□□□□ -0.05
PRKCAP17252 AC079781.5-202ENST00000641784 3743 ntBASIC14.77□□□□□ -0.05
PRKCAP17252 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PRKCAP17252 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.77□□□□□ -0.05
PRKCAP17252 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PRKCAP17252 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
PRKCAP17252 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PRKCAP17252 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
PRKCAP17252 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
PRKCAP17252 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
PRKCAP17252 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PRKCAP17252 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PRKCAP17252 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
PRKCAP17252 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
PRKCAP17252 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
PRKCAP17252 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PRKCAP17252 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.76□□□□□ -0.05
PRKCAP17252 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
PRKCAP17252 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
PRKCAP17252 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.76□□□□□ -0.05
PRKCAP17252 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.76□□□□□ -0.05
PRKCAP17252 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.76□□□□□ -0.05
PRKCAP17252 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PRKCAP17252 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms