Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL11A1P12107 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.65■□□□□ 0.42
COL11A1P12107 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
COL11A1P12107 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
COL11A1P12107 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL11A1P12107 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
COL11A1P12107 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.65■□□□□ 0.42
COL11A1P12107 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.65■□□□□ 0.42
COL11A1P12107 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.65■□□□□ 0.42
COL11A1P12107 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
COL11A1P12107 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
COL11A1P12107 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL11A1P12107 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL11A1P12107 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.65■□□□□ 0.42
COL11A1P12107 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL11A1P12107 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL11A1P12107 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.65■□□□□ 0.42
COL11A1P12107 CALR4P-201ENST00000431943 946 ntBASIC17.65■□□□□ 0.42
COL11A1P12107 AC245100.3-201ENST00000441281 285 ntBASIC17.65■□□□□ 0.42
COL11A1P12107 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.65■□□□□ 0.42
COL11A1P12107 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.65■□□□□ 0.42
COL11A1P12107 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17.65■□□□□ 0.42
COL11A1P12107 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC17.65■□□□□ 0.42
COL11A1P12107 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.65■□□□□ 0.42
COL11A1P12107 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COL11A1P12107 AC005730.2-201ENST00000564549 1184 ntBASIC17.65■□□□□ 0.42
COL11A1P12107 RN7SL713P-201ENST00000582127 302 ntBASIC17.65■□□□□ 0.42
COL11A1P12107 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
COL11A1P12107 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL11A1P12107 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.65■□□□□ 0.42
COL11A1P12107 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.65■□□□□ 0.42
COL11A1P12107 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
COL11A1P12107 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
COL11A1P12107 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
COL11A1P12107 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
COL11A1P12107 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
COL11A1P12107 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
COL11A1P12107 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COL11A1P12107 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.64■□□□□ 0.41
COL11A1P12107 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL11A1P12107 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL11A1P12107 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL11A1P12107 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COL11A1P12107 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.64■□□□□ 0.41
COL11A1P12107 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.64■□□□□ 0.41
COL11A1P12107 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL11A1P12107 BTBD6P1-201ENST00000412176 1267 ntBASIC17.64■□□□□ 0.41
COL11A1P12107 AC091804.1-201ENST00000486888 567 ntBASIC17.64■□□□□ 0.41
COL11A1P12107 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.64■□□□□ 0.41
COL11A1P12107 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
COL11A1P12107 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.64■□□□□ 0.41
COL11A1P12107 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL11A1P12107 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COL11A1P12107 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL11A1P12107 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.64■□□□□ 0.41
COL11A1P12107 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL11A1P12107 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL11A1P12107 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL11A1P12107 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COL11A1P12107 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL11A1P12107 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
COL11A1P12107 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
COL11A1P12107 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
COL11A1P12107 AC127383.1-201ENST00000444697 1800 ntBASIC17.63■□□□□ 0.41
COL11A1P12107 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL11A1P12107 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL11A1P12107 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.63■□□□□ 0.41
COL11A1P12107 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL11A1P12107 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL11A1P12107 AC079178.1-201ENST00000420915 656 ntBASIC17.63■□□□□ 0.41
COL11A1P12107 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.63■□□□□ 0.41
COL11A1P12107 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COL11A1P12107 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.63■□□□□ 0.41
COL11A1P12107 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL11A1P12107 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
COL11A1P12107 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.63■□□□□ 0.41
COL11A1P12107 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL11A1P12107 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL11A1P12107 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL11A1P12107 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL11A1P12107 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.63■□□□□ 0.41
COL11A1P12107 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL11A1P12107 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
COL11A1P12107 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL11A1P12107 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL11A1P12107 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.63■□□□□ 0.41
COL11A1P12107 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL11A1P12107 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
COL11A1P12107 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL11A1P12107 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
COL11A1P12107 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL11A1P12107 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL11A1P12107 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.63■□□□□ 0.41
COL11A1P12107 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.63■□□□□ 0.41
COL11A1P12107 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC17.63■□□□□ 0.41
COL11A1P12107 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
COL11A1P12107 RPSAP36-202ENST00000494591 1261 ntBASIC17.63■□□□□ 0.41
COL11A1P12107 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
COL11A1P12107 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COL11A1P12107 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms