Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
IGHV3-43DP0DP04 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
IGHV3-43DP0DP04 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.24□□□□□ -0.29
IGHV3-43DP0DP04 AC013268.4-201ENST00000637413 2228 ntBASIC13.24□□□□□ -0.29
IGHV3-43DP0DP04 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
IGHV3-43DP0DP04 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
IGHV3-43DP0DP04 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
IGHV3-43DP0DP04 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
IGHV3-43DP0DP04 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.24□□□□□ -0.29
IGHV3-43DP0DP04 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
IGHV3-43DP0DP04 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
IGHV3-43DP0DP04 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
IGHV3-43DP0DP04 BNIP3P1-202ENST00000550043 1585 ntBASIC13.24□□□□□ -0.29
IGHV3-43DP0DP04 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 ELL2P1-201ENST00000413990 1906 ntBASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 PPT1-215ENST00000641471 2368 ntBASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 AL136982.4-201ENST00000437689 1740 ntBASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 AC005237.2-201ENST00000434368 219 ntBASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 MKNK2P1-201ENST00000437526 628 ntBASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 LINC01225-203ENST00000563550 1244 ntBASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 AC005829.1-201ENST00000570002 483 ntBASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 AC010327.4-202ENST00000591484 748 ntBASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 AC097376.2-205ENST00000610159 5334 ntBASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
IGHV3-43DP0DP04 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 AL691432.1-201ENST00000596308 1422 ntBASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 MIR346-201ENST00000362234 95 ntBASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 FAM220BP-201ENST00000377689 816 ntBASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 HLA-H-201ENST00000383620 1096 ntBASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 MIR4469-201ENST00000583919 79 ntBASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 AP3S2-216ENST00000617003 1561 ntBASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV3-43DP0DP04 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms