Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ERCC1P07992 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.16□□□□□ -0.14
ERCC1P07992 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ERCC1P07992 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ERCC1P07992 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ERCC1P07992 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.15□□□□□ -0.14
ERCC1P07992 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.15□□□□□ -0.14
ERCC1P07992 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
ERCC1P07992 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.15□□□□□ -0.14
ERCC1P07992 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ERCC1P07992 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
ERCC1P07992 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.15□□□□□ -0.14
ERCC1P07992 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
ERCC1P07992 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ERCC1P07992 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ERCC1P07992 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ERCC1P07992 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ERCC1P07992 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
ERCC1P07992 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ERCC1P07992 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.15□□□□□ -0.14
ERCC1P07992 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.15□□□□□ -0.14
ERCC1P07992 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ERCC1P07992 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ERCC1P07992 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ERCC1P07992 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.15□□□□□ -0.14
ERCC1P07992 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
ERCC1P07992 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ERCC1P07992 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ERCC1P07992 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.15□□□□□ -0.14
ERCC1P07992 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.15□□□□□ -0.14
ERCC1P07992 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.15□□□□□ -0.14
ERCC1P07992 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.15□□□□□ -0.14
ERCC1P07992 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ERCC1P07992 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ERCC1P07992 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.15□□□□□ -0.14
ERCC1P07992 AC069335.1-201ENST00000489972 472 ntBASIC14.15□□□□□ -0.14
ERCC1P07992 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.15□□□□□ -0.14
ERCC1P07992 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.15□□□□□ -0.14
ERCC1P07992 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
ERCC1P07992 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.15□□□□□ -0.14
ERCC1P07992 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ERCC1P07992 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ERCC1P07992 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.15□□□□□ -0.14
ERCC1P07992 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.15□□□□□ -0.14
ERCC1P07992 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.15□□□□□ -0.14
ERCC1P07992 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ERCC1P07992 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ERCC1P07992 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
ERCC1P07992 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ERCC1P07992 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
ERCC1P07992 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ERCC1P07992 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ERCC1P07992 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ERCC1P07992 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.15□□□□□ -0.14
ERCC1P07992 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ERCC1P07992 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ERCC1P07992 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
ERCC1P07992 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.14□□□□□ -0.15
ERCC1P07992 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
ERCC1P07992 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
ERCC1P07992 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERCC1P07992 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ERCC1P07992 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
ERCC1P07992 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.14□□□□□ -0.15
ERCC1P07992 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
ERCC1P07992 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.14□□□□□ -0.15
ERCC1P07992 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.14□□□□□ -0.15
ERCC1P07992 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.14□□□□□ -0.15
ERCC1P07992 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.14□□□□□ -0.15
ERCC1P07992 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERCC1P07992 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
ERCC1P07992 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERCC1P07992 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
ERCC1P07992 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.14□□□□□ -0.15
ERCC1P07992 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
ERCC1P07992 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
ERCC1P07992 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.14□□□□□ -0.15
ERCC1P07992 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.14□□□□□ -0.15
ERCC1P07992 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.14□□□□□ -0.15
ERCC1P07992 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.14□□□□□ -0.15
ERCC1P07992 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.14□□□□□ -0.15
ERCC1P07992 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERCC1P07992 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.14□□□□□ -0.15
ERCC1P07992 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.14□□□□□ -0.15
ERCC1P07992 AC243562.1-201ENST00000560672 389 ntBASIC14.14□□□□□ -0.15
ERCC1P07992 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.14□□□□□ -0.15
ERCC1P07992 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERCC1P07992 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ERCC1P07992 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ERCC1P07992 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.14□□□□□ -0.15
ERCC1P07992 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.14□□□□□ -0.15
ERCC1P07992 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ERCC1P07992 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ERCC1P07992 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERCC1P07992 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.14□□□□□ -0.15
ERCC1P07992 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERCC1P07992 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.14□□□□□ -0.15
ERCC1P07992 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERCC1P07992 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ERCC1P07992 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms