Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 BCRP7-201ENST00000511549 544 ntBASIC15.98■□□□□ 0.15
RETP07949 AP000812.2-201ENST00000538934 718 ntBASIC15.98■□□□□ 0.15
RETP07949 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RETP07949 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.98■□□□□ 0.15
RETP07949 AC010328.2-201ENST00000597698 1111 ntBASIC15.98■□□□□ 0.15
RETP07949 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.98■□□□□ 0.15
RETP07949 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.98■□□□□ 0.15
RETP07949 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RETP07949 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RETP07949 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.98■□□□□ 0.15
RETP07949 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.98■□□□□ 0.15
RETP07949 ME2P1-201ENST00000426028 1970 ntBASIC15.98■□□□□ 0.15
RETP07949 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RETP07949 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RETP07949 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.98■□□□□ 0.15
RETP07949 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RETP07949 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
RETP07949 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.98■□□□□ 0.15
RETP07949 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RETP07949 AL365203.3-201ENST00000609742 2057 ntBASIC15.98■□□□□ 0.15
RETP07949 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.98■□□□□ 0.15
RETP07949 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.98■□□□□ 0.15
RETP07949 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RETP07949 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.97■□□□□ 0.15
RETP07949 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
RETP07949 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RETP07949 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RETP07949 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.97■□□□□ 0.15
RETP07949 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.97■□□□□ 0.15
RETP07949 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RETP07949 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
RETP07949 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RETP07949 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RETP07949 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.97■□□□□ 0.15
RETP07949 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.97■□□□□ 0.15
RETP07949 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.97■□□□□ 0.15
RETP07949 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.97■□□□□ 0.15
RETP07949 RNA5SP423-201ENST00000517127 109 ntBASIC15.97■□□□□ 0.15
RETP07949 AC036164.1-201ENST00000570544 333 ntBASIC15.97■□□□□ 0.15
RETP07949 AC013467.2-201ENST00000605472 835 ntBASIC15.97■□□□□ 0.15
RETP07949 AC106872.11-201ENST00000605838 421 ntBASIC15.97■□□□□ 0.15
RETP07949 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RETP07949 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RETP07949 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RETP07949 ALOX12P2-203ENST00000570921 1945 ntBASIC15.97■□□□□ 0.15
RETP07949 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.97■□□□□ 0.15
RETP07949 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RETP07949 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.97■□□□□ 0.15
RETP07949 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RETP07949 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RETP07949 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.97■□□□□ 0.15
RETP07949 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RETP07949 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
RETP07949 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RETP07949 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RETP07949 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RETP07949 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RETP07949 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RETP07949 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RETP07949 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
RETP07949 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
RETP07949 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
RETP07949 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
RETP07949 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RETP07949 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RETP07949 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RETP07949 AL671710.1-201ENST00000610245 2349 ntBASIC15.96■□□□□ 0.15
RETP07949 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RETP07949 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RETP07949 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RETP07949 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
RETP07949 KRT8P39-201ENST00000396270 1433 ntBASIC15.96■□□□□ 0.15
RETP07949 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RETP07949 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.96■□□□□ 0.15
RETP07949 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RETP07949 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
RETP07949 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RETP07949 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC15.96■□□□□ 0.15
RETP07949 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.96■□□□□ 0.15
RETP07949 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RETP07949 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RETP07949 FO393414.2-201ENST00000405153 598 ntBASIC15.96■□□□□ 0.15
RETP07949 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.96■□□□□ 0.15
RETP07949 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RETP07949 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC15.96■□□□□ 0.15
RETP07949 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.96■□□□□ 0.15
RETP07949 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.96■□□□□ 0.15
RETP07949 AC079316.1-201ENST00000548397 411 ntBASIC15.96■□□□□ 0.15
RETP07949 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RETP07949 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.96■□□□□ 0.15
RETP07949 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
RETP07949 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RETP07949 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.96■□□□□ 0.15
RETP07949 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.96■□□□□ 0.15
RETP07949 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RETP07949 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RETP07949 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RETP07949 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RETP07949 AC006277.1-201ENST00000624348 1610 ntBASIC15.96■□□□□ 0.15
RETP07949 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms