Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN1P07384 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CAPN1P07384 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN1P07384 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
CAPN1P07384 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN1P07384 AC144831.1-201ENST00000573312 2656 ntBASIC15.68■□□□□ 0.1
CAPN1P07384 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN1P07384 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN1P07384 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.68■□□□□ 0.1
CAPN1P07384 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CAPN1P07384 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN1P07384 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN1P07384 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.68■□□□□ 0.1
CAPN1P07384 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.68■□□□□ 0.1
CAPN1P07384 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CAPN1P07384 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.68■□□□□ 0.1
CAPN1P07384 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.68■□□□□ 0.1
CAPN1P07384 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.68■□□□□ 0.1
CAPN1P07384 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CAPN1P07384 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.68■□□□□ 0.1
CAPN1P07384 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN1P07384 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.68■□□□□ 0.1
CAPN1P07384 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.68■□□□□ 0.1
CAPN1P07384 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN1P07384 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN1P07384 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN1P07384 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.68■□□□□ 0.1
CAPN1P07384 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN1P07384 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN1P07384 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.68■□□□□ 0.1
CAPN1P07384 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN1P07384 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
CAPN1P07384 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.68■□□□□ 0.1
CAPN1P07384 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN1P07384 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN1P07384 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CAPN1P07384 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.68■□□□□ 0.1
CAPN1P07384 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN1P07384 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN1P07384 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN1P07384 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN1P07384 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.67■□□□□ 0.1
CAPN1P07384 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.67■□□□□ 0.1
CAPN1P07384 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.67■□□□□ 0.1
CAPN1P07384 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.67■□□□□ 0.1
CAPN1P07384 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN1P07384 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN1P07384 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.67■□□□□ 0.1
CAPN1P07384 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CAPN1P07384 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN1P07384 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CAPN1P07384 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CAPN1P07384 DBET-201ENST00000630918 3363 ntBASIC15.67■□□□□ 0.1
CAPN1P07384 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN1P07384 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CAPN1P07384 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.67■□□□□ 0.1
CAPN1P07384 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.67■□□□□ 0.1
CAPN1P07384 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.67■□□□□ 0.1
CAPN1P07384 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN1P07384 AC055876.3-201ENST00000431496 288 ntBASIC15.67■□□□□ 0.1
CAPN1P07384 ALG1L8P-201ENST00000533887 760 ntBASIC15.67■□□□□ 0.1
CAPN1P07384 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CAPN1P07384 MIR4321-201ENST00000592276 80 ntBASIC15.67■□□□□ 0.1
CAPN1P07384 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN1P07384 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.67■□□□□ 0.1
CAPN1P07384 AC138649.4-201ENST00000612222 287 ntBASIC15.67■□□□□ 0.1
CAPN1P07384 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.67■□□□□ 0.1
CAPN1P07384 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN1P07384 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN1P07384 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN1P07384 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN1P07384 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN1P07384 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.67■□□□□ 0.1
CAPN1P07384 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CAPN1P07384 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.67■□□□□ 0.1
CAPN1P07384 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.67■□□□□ 0.1
CAPN1P07384 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN1P07384 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.67■□□□□ 0.1
CAPN1P07384 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN1P07384 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.66■□□□□ 0.1
CAPN1P07384 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.66■□□□□ 0.1
CAPN1P07384 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CAPN1P07384 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.66■□□□□ 0.1
CAPN1P07384 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CAPN1P07384 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.66■□□□□ 0.1
CAPN1P07384 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CAPN1P07384 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CAPN1P07384 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CAPN1P07384 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CAPN1P07384 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CAPN1P07384 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.66■□□□□ 0.1
CAPN1P07384 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
CAPN1P07384 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CAPN1P07384 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.66■□□□□ 0.1
CAPN1P07384 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CAPN1P07384 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CAPN1P07384 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.66■□□□□ 0.1
CAPN1P07384 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CAPN1P07384 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.66■□□□□ 0.1
CAPN1P07384 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms