Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL5A2P05997 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL5A2P05997 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC20.4■□□□□ 0.86
COL5A2P05997 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COL5A2P05997 FLJ38576-201ENST00000623820 2459 ntBASIC20.4■□□□□ 0.86
COL5A2P05997 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
COL5A2P05997 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC20.4■□□□□ 0.86
COL5A2P05997 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL5A2P05997 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
COL5A2P05997 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL5A2P05997 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC20.4■□□□□ 0.86
COL5A2P05997 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL5A2P05997 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC20.4■□□□□ 0.86
COL5A2P05997 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COL5A2P05997 PFN2-205ENST00000461868 613 ntTSL 2 BASIC20.4■□□□□ 0.86
COL5A2P05997 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC20.4■□□□□ 0.86
COL5A2P05997 AC008267.1-201ENST00000474858 1069 ntBASIC20.4■□□□□ 0.86
COL5A2P05997 AC005740.2-201ENST00000511085 419 ntBASIC20.4■□□□□ 0.86
COL5A2P05997 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COL5A2P05997 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
COL5A2P05997 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC20.4■□□□□ 0.86
COL5A2P05997 MIR4783-201ENST00000580343 82 ntBASIC20.4■□□□□ 0.86
COL5A2P05997 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC20.4■□□□□ 0.86
COL5A2P05997 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
COL5A2P05997 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
COL5A2P05997 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL5A2P05997 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
COL5A2P05997 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL5A2P05997 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
COL5A2P05997 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC20.39■□□□□ 0.86
COL5A2P05997 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC20.39■□□□□ 0.86
COL5A2P05997 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC20.39■□□□□ 0.86
COL5A2P05997 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
COL5A2P05997 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
COL5A2P05997 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
COL5A2P05997 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL5A2P05997 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COL5A2P05997 AC069218.1-201ENST00000435269 762 ntBASIC20.39■□□□□ 0.85
COL5A2P05997 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL5A2P05997 BNIP3P13-201ENST00000599968 566 ntBASIC20.39■□□□□ 0.85
COL5A2P05997 MIR7845-201ENST00000618396 99 ntBASIC20.39■□□□□ 0.85
COL5A2P05997 AC100757.4-201ENST00000626934 759 ntBASIC20.39■□□□□ 0.85
COL5A2P05997 KRT8P29-201ENST00000420409 1371 ntBASIC20.39■□□□□ 0.85
COL5A2P05997 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COL5A2P05997 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL5A2P05997 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
COL5A2P05997 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL5A2P05997 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.39■□□□□ 0.85
COL5A2P05997 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COL5A2P05997 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC20.39■□□□□ 0.85
COL5A2P05997 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL5A2P05997 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL5A2P05997 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL5A2P05997 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC20.38■□□□□ 0.85
COL5A2P05997 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL5A2P05997 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COL5A2P05997 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
COL5A2P05997 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COL5A2P05997 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL5A2P05997 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COL5A2P05997 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COL5A2P05997 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC20.38■□□□□ 0.85
COL5A2P05997 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC20.38■□□□□ 0.85
COL5A2P05997 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL5A2P05997 AL161670.2-201ENST00000557650 1227 ntBASIC20.38■□□□□ 0.85
COL5A2P05997 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC20.38■□□□□ 0.85
COL5A2P05997 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC20.38■□□□□ 0.85
COL5A2P05997 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL5A2P05997 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL5A2P05997 AC106820.2-201ENST00000563775 3264 ntBASIC20.38■□□□□ 0.85
COL5A2P05997 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL5A2P05997 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL5A2P05997 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL5A2P05997 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
COL5A2P05997 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC20.37■□□□□ 0.85
COL5A2P05997 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COL5A2P05997 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL5A2P05997 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC20.37■□□□□ 0.85
COL5A2P05997 AC011742.3-201ENST00000439053 820 ntBASIC20.37■□□□□ 0.85
COL5A2P05997 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC20.37■□□□□ 0.85
COL5A2P05997 AC004066.1-201ENST00000502488 802 ntBASIC20.37■□□□□ 0.85
COL5A2P05997 AC106794.1-201ENST00000506935 792 ntBASIC20.37■□□□□ 0.85
COL5A2P05997 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC20.37■□□□□ 0.85
COL5A2P05997 CSH2-206ENST00000560142 749 ntTSL 5 BASIC20.37■□□□□ 0.85
COL5A2P05997 SYT17-208ENST00000568433 812 ntTSL 3 BASIC20.37■□□□□ 0.85
COL5A2P05997 RN7SL555P-201ENST00000584742 339 ntBASIC20.37■□□□□ 0.85
COL5A2P05997 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL5A2P05997 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC20.37■□□□□ 0.85
COL5A2P05997 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL5A2P05997 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL5A2P05997 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
COL5A2P05997 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
COL5A2P05997 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL5A2P05997 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COL5A2P05997 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL5A2P05997 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.37■□□□□ 0.85
COL5A2P05997 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
COL5A2P05997 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL5A2P05997 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC20.37■□□□□ 0.85
COL5A2P05997 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms