Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DPB1P04440 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
HLA-DPB1P04440 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DPB1P04440 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DPB1P04440 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DPB1P04440 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.34□□□□□ -0.11
HLA-DPB1P04440 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DPB1P04440 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DPB1P04440 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
HLA-DPB1P04440 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DPB1P04440 AL022342.1-201ENST00000400363 863 ntBASIC14.34□□□□□ -0.11
HLA-DPB1P04440 MIR940-201ENST00000401276 94 ntBASIC14.34□□□□□ -0.11
HLA-DPB1P04440 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.34□□□□□ -0.11
HLA-DPB1P04440 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DPB1P04440 KRT18P2-201ENST00000447938 1258 ntBASIC14.34□□□□□ -0.11
HLA-DPB1P04440 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.34□□□□□ -0.11
HLA-DPB1P04440 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.34□□□□□ -0.11
HLA-DPB1P04440 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.34□□□□□ -0.11
HLA-DPB1P04440 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
HLA-DPB1P04440 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.34□□□□□ -0.11
HLA-DPB1P04440 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DPB1P04440 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.34□□□□□ -0.11
HLA-DPB1P04440 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.34□□□□□ -0.11
HLA-DPB1P04440 AC010507.1-201ENST00000633895 436 ntBASIC14.34□□□□□ -0.11
HLA-DPB1P04440 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.34□□□□□ -0.11
HLA-DPB1P04440 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DPB1P04440 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DPB1P04440 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.34□□□□□ -0.11
HLA-DPB1P04440 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DPB1P04440 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.34□□□□□ -0.11
HLA-DPB1P04440 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.34□□□□□ -0.11
HLA-DPB1P04440 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DPB1P04440 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DPB1P04440 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DPB1P04440 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DPB1P04440 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DPB1P04440 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DPB1P04440 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.34□□□□□ -0.11
HLA-DPB1P04440 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
HLA-DPB1P04440 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DPB1P04440 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HLA-DPB1P04440 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HLA-DPB1P04440 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
HLA-DPB1P04440 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.33□□□□□ -0.11
HLA-DPB1P04440 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.33□□□□□ -0.11
HLA-DPB1P04440 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HLA-DPB1P04440 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HLA-DPB1P04440 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.33□□□□□ -0.12
HLA-DPB1P04440 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DPB1P04440 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.33□□□□□ -0.12
HLA-DPB1P04440 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
HLA-DPB1P04440 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.33□□□□□ -0.12
HLA-DPB1P04440 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.33□□□□□ -0.12
HLA-DPB1P04440 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DPB1P04440 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
HLA-DPB1P04440 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DPB1P04440 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.33□□□□□ -0.12
HLA-DPB1P04440 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
HLA-DPB1P04440 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DPB1P04440 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.33□□□□□ -0.12
HLA-DPB1P04440 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.33□□□□□ -0.12
HLA-DPB1P04440 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.33□□□□□ -0.12
HLA-DPB1P04440 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.33□□□□□ -0.12
HLA-DPB1P04440 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DPB1P04440 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DPB1P04440 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DPB1P04440 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.33□□□□□ -0.12
HLA-DPB1P04440 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DPB1P04440 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.33□□□□□ -0.12
HLA-DPB1P04440 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DPB1P04440 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.33□□□□□ -0.12
HLA-DPB1P04440 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DPB1P04440 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DPB1P04440 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DPB1P04440 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DPB1P04440 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DPB1P04440 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.32□□□□□ -0.12
HLA-DPB1P04440 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DPB1P04440 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DPB1P04440 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
HLA-DPB1P04440 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.32□□□□□ -0.12
HLA-DPB1P04440 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
HLA-DPB1P04440 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DPB1P04440 AC012569.1-201ENST00000591191 1524 ntBASIC14.32□□□□□ -0.12
HLA-DPB1P04440 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.32□□□□□ -0.12
HLA-DPB1P04440 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.32□□□□□ -0.12
HLA-DPB1P04440 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DPB1P04440 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DPB1P04440 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DPB1P04440 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
HLA-DPB1P04440 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DPB1P04440 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.32□□□□□ -0.12
HLA-DPB1P04440 MED15P5-201ENST00000423150 992 ntBASIC14.32□□□□□ -0.12
HLA-DPB1P04440 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
HLA-DPB1P04440 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.32□□□□□ -0.12
HLA-DPB1P04440 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.32□□□□□ -0.12
HLA-DPB1P04440 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.32□□□□□ -0.12
HLA-DPB1P04440 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.32□□□□□ -0.12
HLA-DPB1P04440 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.32□□□□□ -0.12
HLA-DPB1P04440 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms