Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.24■□□□□ 0.19
MT-ND3P03897 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
MT-ND3P03897 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MT-ND3P03897 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MT-ND3P03897 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MT-ND3P03897 HMGA1P7-201ENST00000406908 502 ntBASIC16.24■□□□□ 0.19
MT-ND3P03897 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
MT-ND3P03897 PMS2P4-201ENST00000412466 1052 ntBASIC16.24■□□□□ 0.19
MT-ND3P03897 FAM58CP-201ENST00000435741 640 ntBASIC16.24■□□□□ 0.19
MT-ND3P03897 METTL21AP1-201ENST00000438852 635 ntBASIC16.24■□□□□ 0.19
MT-ND3P03897 FAM185BP-201ENST00000443595 716 ntBASIC16.24■□□□□ 0.19
MT-ND3P03897 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.24■□□□□ 0.19
MT-ND3P03897 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.24■□□□□ 0.19
MT-ND3P03897 AC027796.2-201ENST00000575326 344 ntBASIC16.24■□□□□ 0.19
MT-ND3P03897 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.24■□□□□ 0.19
MT-ND3P03897 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.24■□□□□ 0.19
MT-ND3P03897 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MT-ND3P03897 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.24■□□□□ 0.19
MT-ND3P03897 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MT-ND3P03897 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MT-ND3P03897 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MT-ND3P03897 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
MT-ND3P03897 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MT-ND3P03897 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MT-ND3P03897 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.24■□□□□ 0.19
MT-ND3P03897 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MT-ND3P03897 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MT-ND3P03897 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.24■□□□□ 0.19
MT-ND3P03897 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.24■□□□□ 0.19
MT-ND3P03897 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
MT-ND3P03897 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MT-ND3P03897 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
MT-ND3P03897 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
MT-ND3P03897 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MT-ND3P03897 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MT-ND3P03897 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
MT-ND3P03897 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MT-ND3P03897 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
MT-ND3P03897 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.23■□□□□ 0.19
MT-ND3P03897 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
MT-ND3P03897 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.23■□□□□ 0.19
MT-ND3P03897 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
MT-ND3P03897 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MT-ND3P03897 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MT-ND3P03897 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.23■□□□□ 0.19
MT-ND3P03897 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MT-ND3P03897 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
MT-ND3P03897 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
MT-ND3P03897 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
MT-ND3P03897 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MT-ND3P03897 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MT-ND3P03897 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
MT-ND3P03897 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MT-ND3P03897 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MT-ND3P03897 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.23■□□□□ 0.19
MT-ND3P03897 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MT-ND3P03897 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MT-ND3P03897 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.23■□□□□ 0.19
MT-ND3P03897 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.23■□□□□ 0.19
MT-ND3P03897 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.23■□□□□ 0.19
MT-ND3P03897 AP000344.2-201ENST00000512987 629 ntBASIC16.23■□□□□ 0.19
MT-ND3P03897 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.23■□□□□ 0.19
MT-ND3P03897 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.23■□□□□ 0.19
MT-ND3P03897 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.23■□□□□ 0.19
MT-ND3P03897 AC068137.2-201ENST00000605408 478 ntBASIC16.23■□□□□ 0.19
MT-ND3P03897 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MT-ND3P03897 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.23■□□□□ 0.19
MT-ND3P03897 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
MT-ND3P03897 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MT-ND3P03897 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MT-ND3P03897 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
MT-ND3P03897 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MT-ND3P03897 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
MT-ND3P03897 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MT-ND3P03897 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MT-ND3P03897 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.23■□□□□ 0.19
MT-ND3P03897 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.23■□□□□ 0.19
MT-ND3P03897 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MT-ND3P03897 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MT-ND3P03897 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MT-ND3P03897 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
MT-ND3P03897 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.22■□□□□ 0.19
MT-ND3P03897 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MT-ND3P03897 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
MT-ND3P03897 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MT-ND3P03897 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MT-ND3P03897 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MT-ND3P03897 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
MT-ND3P03897 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MT-ND3P03897 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MT-ND3P03897 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MT-ND3P03897 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
MT-ND3P03897 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
MT-ND3P03897 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
MT-ND3P03897 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
MT-ND3P03897 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
MT-ND3P03897 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
MT-ND3P03897 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.22■□□□□ 0.19
MT-ND3P03897 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.22■□□□□ 0.19
MT-ND3P03897 AC093724.1-201ENST00000448659 1027 ntBASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms