Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MT-ND1P03886 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.04■□□□□ -0
MT-ND1P03886 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.04■□□□□ -0
MT-ND1P03886 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.04■□□□□ -0
MT-ND1P03886 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.04■□□□□ -0
MT-ND1P03886 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.04■□□□□ -0
MT-ND1P03886 AC148477.8-201ENST00000624298 468 ntBASIC15.04■□□□□ -0
MT-ND1P03886 FAM215A-202ENST00000632077 792 ntBASIC15.04■□□□□ -0
MT-ND1P03886 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
MT-ND1P03886 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.04■□□□□ -0
MT-ND1P03886 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.04■□□□□ -0
MT-ND1P03886 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.04■□□□□ -0
MT-ND1P03886 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MT-ND1P03886 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
MT-ND1P03886 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
MT-ND1P03886 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
MT-ND1P03886 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.04■□□□□ -0
MT-ND1P03886 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
MT-ND1P03886 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
MT-ND1P03886 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MT-ND1P03886 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.04■□□□□ -0
MT-ND1P03886 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MT-ND1P03886 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MT-ND1P03886 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MT-ND1P03886 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
MT-ND1P03886 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MT-ND1P03886 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MT-ND1P03886 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
MT-ND1P03886 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MT-ND1P03886 AC007191.1-201ENST00000623179 2995 ntBASIC15.03■□□□□ -0
MT-ND1P03886 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MT-ND1P03886 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MT-ND1P03886 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
MT-ND1P03886 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MT-ND1P03886 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.03■□□□□ -0
MT-ND1P03886 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.03■□□□□ -0
MT-ND1P03886 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
MT-ND1P03886 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
MT-ND1P03886 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.03■□□□□ -0
MT-ND1P03886 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MT-ND1P03886 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
MT-ND1P03886 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.03■□□□□ -0
MT-ND1P03886 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
MT-ND1P03886 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MT-ND1P03886 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MT-ND1P03886 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
MT-ND1P03886 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.03■□□□□ -0
MT-ND1P03886 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.03■□□□□ -0
MT-ND1P03886 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.03■□□□□ -0
MT-ND1P03886 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
MT-ND1P03886 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.03■□□□□ -0
MT-ND1P03886 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.03■□□□□ -0
MT-ND1P03886 FAM185BP-201ENST00000443595 716 ntBASIC15.03■□□□□ -0
MT-ND1P03886 MIR4515-201ENST00000584082 81 ntBASIC15.03■□□□□ -0
MT-ND1P03886 AL031055.1-201ENST00000606362 631 ntBASIC15.03■□□□□ -0
MT-ND1P03886 AC021097.1-201ENST00000607902 574 ntBASIC15.03■□□□□ -0
MT-ND1P03886 AL691432.3-201ENST00000621860 400 ntBASIC15.03■□□□□ -0
MT-ND1P03886 AC117500.6-201ENST00000624871 588 ntBASIC15.03■□□□□ -0
MT-ND1P03886 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MT-ND1P03886 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MT-ND1P03886 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
MT-ND1P03886 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MT-ND1P03886 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.03■□□□□ -0
MT-ND1P03886 LINC01101-201ENST00000622953 1884 ntBASIC15.03■□□□□ -0
MT-ND1P03886 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.03■□□□□ -0
MT-ND1P03886 AC018892.3-201ENST00000623986 2499 ntBASIC15.03■□□□□ -0
MT-ND1P03886 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MT-ND1P03886 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.03■□□□□ -0
MT-ND1P03886 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.03■□□□□ -0
MT-ND1P03886 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.02■□□□□ -0
MT-ND1P03886 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
MT-ND1P03886 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
MT-ND1P03886 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.02■□□□□ -0
MT-ND1P03886 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
MT-ND1P03886 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MT-ND1P03886 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.02■□□□□ -0
MT-ND1P03886 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MT-ND1P03886 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MT-ND1P03886 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MT-ND1P03886 AC004870.1-201ENST00000315132 882 ntBASIC15.02■□□□□ -0
MT-ND1P03886 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MT-ND1P03886 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
MT-ND1P03886 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.02■□□□□ -0
MT-ND1P03886 PRSS29P-201ENST00000440800 595 ntBASIC15.02■□□□□ -0
MT-ND1P03886 AC093724.1-201ENST00000448659 1027 ntBASIC15.02■□□□□ -0
MT-ND1P03886 AC079781.3-201ENST00000449110 356 ntBASIC15.02■□□□□ -0
MT-ND1P03886 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.02■□□□□ -0
MT-ND1P03886 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
MT-ND1P03886 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.02■□□□□ -0
MT-ND1P03886 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.02■□□□□ -0
MT-ND1P03886 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.02■□□□□ -0
MT-ND1P03886 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MT-ND1P03886 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
MT-ND1P03886 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.02■□□□□ -0
MT-ND1P03886 RN7SL510P-201ENST00000581311 263 ntBASIC15.02■□□□□ -0
MT-ND1P03886 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.02■□□□□ -0
MT-ND1P03886 ACTL9-202ENST00000612068 1252 ntBASIC15.02■□□□□ -0
MT-ND1P03886 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.02■□□□□ -0
MT-ND1P03886 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
MT-ND1P03886 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms