Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA1P02708 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.1■□□□□ 0.33
CHRNA1P02708 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.1■□□□□ 0.33
CHRNA1P02708 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNA1P02708 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CHRNA1P02708 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.09■□□□□ 0.33
CHRNA1P02708 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNA1P02708 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNA1P02708 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNA1P02708 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.09■□□□□ 0.33
CHRNA1P02708 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CHRNA1P02708 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CHRNA1P02708 YBX1P6-201ENST00000442962 1002 ntBASIC17.09■□□□□ 0.33
CHRNA1P02708 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNA1P02708 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CHRNA1P02708 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CHRNA1P02708 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.09■□□□□ 0.33
CHRNA1P02708 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.09■□□□□ 0.33
CHRNA1P02708 AC025279.2-201ENST00000569730 653 ntBASIC17.09■□□□□ 0.33
CHRNA1P02708 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.09■□□□□ 0.33
CHRNA1P02708 AC010328.2-201ENST00000597698 1111 ntBASIC17.09■□□□□ 0.33
CHRNA1P02708 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.09■□□□□ 0.33
CHRNA1P02708 AC009542.2-202ENST00000619004 1067 ntBASIC17.09■□□□□ 0.33
CHRNA1P02708 AC008687.7-202ENST00000637404 953 ntBASIC17.09■□□□□ 0.33
CHRNA1P02708 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.09■□□□□ 0.33
CHRNA1P02708 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNA1P02708 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.09■□□□□ 0.33
CHRNA1P02708 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNA1P02708 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CHRNA1P02708 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNA1P02708 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNA1P02708 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.09■□□□□ 0.33
CHRNA1P02708 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHRNA1P02708 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHRNA1P02708 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHRNA1P02708 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
CHRNA1P02708 PCDHA14-201ENST00000506751 2298 ntBASIC17.08■□□□□ 0.33
CHRNA1P02708 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.08■□□□□ 0.33
CHRNA1P02708 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHRNA1P02708 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHRNA1P02708 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
CHRNA1P02708 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHRNA1P02708 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.08■□□□□ 0.33
CHRNA1P02708 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHRNA1P02708 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHRNA1P02708 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHRNA1P02708 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CHRNA1P02708 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.08■□□□□ 0.32
CHRNA1P02708 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHRNA1P02708 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHRNA1P02708 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHRNA1P02708 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHRNA1P02708 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHRNA1P02708 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.08■□□□□ 0.32
CHRNA1P02708 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.08■□□□□ 0.32
CHRNA1P02708 C2orf27AP3-201ENST00000434123 579 ntBASIC17.08■□□□□ 0.32
CHRNA1P02708 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHRNA1P02708 RPL13AP20-201ENST00000459725 609 ntBASIC17.08■□□□□ 0.32
CHRNA1P02708 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.08■□□□□ 0.32
CHRNA1P02708 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHRNA1P02708 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.08■□□□□ 0.32
CHRNA1P02708 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.08■□□□□ 0.32
CHRNA1P02708 AP005019.2-201ENST00000615104 511 ntBASIC17.08■□□□□ 0.32
CHRNA1P02708 AL354718.3-201ENST00000616414 581 ntBASIC17.08■□□□□ 0.32
CHRNA1P02708 CR382287.1-201ENST00000623954 586 ntBASIC17.08■□□□□ 0.32
CHRNA1P02708 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.08■□□□□ 0.32
CHRNA1P02708 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHRNA1P02708 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHRNA1P02708 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.08■□□□□ 0.32
CHRNA1P02708 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHRNA1P02708 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHRNA1P02708 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHRNA1P02708 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHRNA1P02708 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHRNA1P02708 AL138799.1-201ENST00000448213 1675 ntBASIC17.07■□□□□ 0.32
CHRNA1P02708 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHRNA1P02708 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CHRNA1P02708 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CHRNA1P02708 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHRNA1P02708 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.07■□□□□ 0.32
CHRNA1P02708 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHRNA1P02708 AC020907.1-201ENST00000616460 1350 ntBASIC17.07■□□□□ 0.32
CHRNA1P02708 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHRNA1P02708 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHRNA1P02708 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.07■□□□□ 0.32
CHRNA1P02708 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.07■□□□□ 0.32
CHRNA1P02708 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.07■□□□□ 0.32
CHRNA1P02708 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.07■□□□□ 0.32
CHRNA1P02708 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CHRNA1P02708 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.07■□□□□ 0.32
CHRNA1P02708 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.07■□□□□ 0.32
CHRNA1P02708 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.07■□□□□ 0.32
CHRNA1P02708 DUX4L45-201ENST00000566406 1057 ntBASIC17.07■□□□□ 0.32
CHRNA1P02708 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.07■□□□□ 0.32
CHRNA1P02708 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHRNA1P02708 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHRNA1P02708 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.07■□□□□ 0.32
CHRNA1P02708 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.07■□□□□ 0.32
CHRNA1P02708 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.07■□□□□ 0.32
CHRNA1P02708 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms