Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DQA2P01906 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 ST20-AS1-201ENST00000560255 4223 ntBASIC14.31□□□□□ -0.12
HLA-DQA2P01906 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 AC024267.1-201ENST00000582320 895 ntBASIC14.31□□□□□ -0.12
HLA-DQA2P01906 AC140113.2-201ENST00000604370 208 ntBASIC14.31□□□□□ -0.12
HLA-DQA2P01906 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 AC092865.6-201ENST00000642101 219 ntBASIC14.31□□□□□ -0.12
HLA-DQA2P01906 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.31□□□□□ -0.12
HLA-DQA2P01906 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DQA2P01906 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DQA2P01906 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DQA2P01906 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
HLA-DQA2P01906 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DQA2P01906 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DQA2P01906 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DQA2P01906 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DQA2P01906 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DQA2P01906 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.3□□□□□ -0.12
HLA-DQA2P01906 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.3□□□□□ -0.12
HLA-DQA2P01906 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DQA2P01906 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DQA2P01906 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DQA2P01906 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.3□□□□□ -0.12
HLA-DQA2P01906 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DQA2P01906 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DQA2P01906 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.3□□□□□ -0.12
HLA-DQA2P01906 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.3□□□□□ -0.12
HLA-DQA2P01906 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DQA2P01906 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DQA2P01906 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DQA2P01906 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.3□□□□□ -0.12
HLA-DQA2P01906 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DQA2P01906 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.3□□□□□ -0.12
HLA-DQA2P01906 AC105233.2-201ENST00000523697 349 ntBASIC14.3□□□□□ -0.12
HLA-DQA2P01906 AF228730.5-201ENST00000530288 346 ntBASIC14.3□□□□□ -0.12
HLA-DQA2P01906 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.3□□□□□ -0.12
HLA-DQA2P01906 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DQA2P01906 AL121894.2-201ENST00000602977 491 ntBASIC14.3□□□□□ -0.12
HLA-DQA2P01906 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
HLA-DQA2P01906 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.3□□□□□ -0.12
HLA-DQA2P01906 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DQA2P01906 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.3□□□□□ -0.12
HLA-DQA2P01906 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.3□□□□□ -0.12
HLA-DQA2P01906 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DQA2P01906 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms