Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.84■□□□□ 0.61
MBD4O95243 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
MBD4O95243 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MBD4O95243 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MBD4O95243 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.84■□□□□ 0.61
MBD4O95243 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MBD4O95243 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
MBD4O95243 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.83■□□□□ 0.61
MBD4O95243 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MBD4O95243 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MBD4O95243 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.61
MBD4O95243 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
MBD4O95243 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
MBD4O95243 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MBD4O95243 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MBD4O95243 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MBD4O95243 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.83■□□□□ 0.6
MBD4O95243 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.83■□□□□ 0.6
MBD4O95243 COX5BP8-201ENST00000416911 349 ntBASIC18.83■□□□□ 0.6
MBD4O95243 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.83■□□□□ 0.6
MBD4O95243 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.83■□□□□ 0.6
MBD4O95243 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.83■□□□□ 0.6
MBD4O95243 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.83■□□□□ 0.6
MBD4O95243 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MBD4O95243 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MBD4O95243 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MBD4O95243 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MBD4O95243 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.83■□□□□ 0.6
MBD4O95243 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
MBD4O95243 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MBD4O95243 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MBD4O95243 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MBD4O95243 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MBD4O95243 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.83■□□□□ 0.6
MBD4O95243 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.83■□□□□ 0.6
MBD4O95243 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MBD4O95243 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MBD4O95243 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.82■□□□□ 0.6
MBD4O95243 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.82■□□□□ 0.6
MBD4O95243 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MBD4O95243 TP73-209ENST00000603362 1668 ntTSL 5 BASIC18.82■□□□□ 0.6
MBD4O95243 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MBD4O95243 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.82■□□□□ 0.6
MBD4O95243 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MBD4O95243 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
MBD4O95243 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MBD4O95243 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.82■□□□□ 0.6
MBD4O95243 AP005117.1-202ENST00000581724 1908 ntBASIC18.82■□□□□ 0.6
MBD4O95243 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MBD4O95243 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
MBD4O95243 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
MBD4O95243 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
MBD4O95243 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
MBD4O95243 AC008894.3-201ENST00000624324 3103 ntBASIC18.82■□□□□ 0.6
MBD4O95243 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MBD4O95243 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.82■□□□□ 0.6
MBD4O95243 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.82■□□□□ 0.6
MBD4O95243 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
MBD4O95243 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
MBD4O95243 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.82■□□□□ 0.6
MBD4O95243 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.82■□□□□ 0.6
MBD4O95243 AC005034.1-201ENST00000426657 489 ntBASIC18.82■□□□□ 0.6
MBD4O95243 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.82■□□□□ 0.6
MBD4O95243 FAM86LP-201ENST00000478302 853 ntBASIC18.82■□□□□ 0.6
MBD4O95243 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.82■□□□□ 0.6
MBD4O95243 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MBD4O95243 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.82■□□□□ 0.6
MBD4O95243 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.82■□□□□ 0.6
MBD4O95243 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MBD4O95243 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
MBD4O95243 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
MBD4O95243 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
MBD4O95243 AL035252.4-201ENST00000624174 288 ntBASIC18.82■□□□□ 0.6
MBD4O95243 AL358472.5-202ENST00000641448 1267 ntBASIC18.82■□□□□ 0.6
MBD4O95243 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
MBD4O95243 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
MBD4O95243 AL139384.1-201ENST00000612143 3047 ntBASIC18.82■□□□□ 0.6
MBD4O95243 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
MBD4O95243 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
MBD4O95243 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MBD4O95243 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
MBD4O95243 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MBD4O95243 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.82■□□□□ 0.6
MBD4O95243 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MBD4O95243 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
MBD4O95243 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MBD4O95243 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MBD4O95243 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MBD4O95243 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
MBD4O95243 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MBD4O95243 CICP13-201ENST00000422015 2789 ntBASIC18.81■□□□□ 0.6
MBD4O95243 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MBD4O95243 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MBD4O95243 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MBD4O95243 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
MBD4O95243 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.81■□□□□ 0.6
MBD4O95243 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MBD4O95243 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
MBD4O95243 KRT18P43-201ENST00000469825 1281 ntBASIC18.81■□□□□ 0.6
MBD4O95243 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms