Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSPG5O95196 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSPG5O95196 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.03■□□□□ 0.32
CSPG5O95196 AC008741.2-201ENST00000612792 3115 ntBASIC17.03■□□□□ 0.32
CSPG5O95196 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSPG5O95196 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.03■□□□□ 0.32
CSPG5O95196 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSPG5O95196 AC106886.4-201ENST00000623557 2502 ntBASIC17.03■□□□□ 0.32
CSPG5O95196 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
CSPG5O95196 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CSPG5O95196 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSPG5O95196 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSPG5O95196 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.03■□□□□ 0.32
CSPG5O95196 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
CSPG5O95196 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CSPG5O95196 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSPG5O95196 CSF2RBP1-201ENST00000447905 391 ntBASIC17.03■□□□□ 0.32
CSPG5O95196 AP002490.2-201ENST00000524791 560 ntBASIC17.03■□□□□ 0.32
CSPG5O95196 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.03■□□□□ 0.32
CSPG5O95196 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.03■□□□□ 0.32
CSPG5O95196 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.03■□□□□ 0.32
CSPG5O95196 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.03■□□□□ 0.32
CSPG5O95196 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSPG5O95196 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.03■□□□□ 0.32
CSPG5O95196 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CSPG5O95196 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSPG5O95196 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSPG5O95196 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSPG5O95196 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSPG5O95196 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSPG5O95196 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSPG5O95196 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSPG5O95196 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.03■□□□□ 0.32
CSPG5O95196 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.03■□□□□ 0.32
CSPG5O95196 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CSPG5O95196 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSPG5O95196 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CSPG5O95196 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSPG5O95196 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.02■□□□□ 0.32
CSPG5O95196 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CSPG5O95196 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CSPG5O95196 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CSPG5O95196 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSPG5O95196 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CSPG5O95196 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSPG5O95196 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSPG5O95196 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSPG5O95196 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CSPG5O95196 MSTO2P-201ENST00000314835 1709 ntBASIC17.02■□□□□ 0.32
CSPG5O95196 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CSPG5O95196 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CSPG5O95196 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CSPG5O95196 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSPG5O95196 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CSPG5O95196 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CSPG5O95196 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSPG5O95196 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CSPG5O95196 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.02■□□□□ 0.32
CSPG5O95196 FAM21FP-201ENST00000426241 1131 ntBASIC17.02■□□□□ 0.32
CSPG5O95196 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
CSPG5O95196 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.02■□□□□ 0.32
CSPG5O95196 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CSPG5O95196 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.02■□□□□ 0.32
CSPG5O95196 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.02■□□□□ 0.32
CSPG5O95196 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.02■□□□□ 0.32
CSPG5O95196 AL139011.1-202ENST00000642063 584 ntBASIC17.02■□□□□ 0.32
CSPG5O95196 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CSPG5O95196 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.02■□□□□ 0.31
CSPG5O95196 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
CSPG5O95196 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
CSPG5O95196 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.02■□□□□ 0.31
CSPG5O95196 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CSPG5O95196 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CSPG5O95196 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
CSPG5O95196 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CSPG5O95196 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CSPG5O95196 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.02■□□□□ 0.31
CSPG5O95196 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CSPG5O95196 AC005052.1-201ENST00000625181 2492 ntBASIC17.02■□□□□ 0.31
CSPG5O95196 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
CSPG5O95196 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CSPG5O95196 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSPG5O95196 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CSPG5O95196 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSPG5O95196 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSPG5O95196 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSPG5O95196 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSPG5O95196 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSPG5O95196 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.01■□□□□ 0.31
CSPG5O95196 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSPG5O95196 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSPG5O95196 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.01■□□□□ 0.31
CSPG5O95196 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSPG5O95196 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSPG5O95196 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.01■□□□□ 0.31
CSPG5O95196 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSPG5O95196 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.01■□□□□ 0.31
CSPG5O95196 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CSPG5O95196 FAM86LP-201ENST00000478302 853 ntBASIC17.01■□□□□ 0.31
CSPG5O95196 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms