Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1BO75841 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
UPK1BO75841 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1BO75841 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
UPK1BO75841 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.84□□□□□ -0.19
UPK1BO75841 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.84□□□□□ -0.19
UPK1BO75841 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1BO75841 ARMC10P1-201ENST00000313754 855 ntBASIC13.84□□□□□ -0.19
UPK1BO75841 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1BO75841 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.84□□□□□ -0.19
UPK1BO75841 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC13.84□□□□□ -0.19
UPK1BO75841 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
UPK1BO75841 AC006058.3-201ENST00000606217 1069 ntBASIC13.84□□□□□ -0.19
UPK1BO75841 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.84□□□□□ -0.19
UPK1BO75841 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.84□□□□□ -0.19
UPK1BO75841 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
UPK1BO75841 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.84□□□□□ -0.19
UPK1BO75841 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
UPK1BO75841 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1BO75841 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
UPK1BO75841 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
UPK1BO75841 AC015909.5-201ENST00000624336 2266 ntBASIC13.84□□□□□ -0.19
UPK1BO75841 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
UPK1BO75841 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1BO75841 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1BO75841 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1BO75841 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
UPK1BO75841 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1BO75841 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1BO75841 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
UPK1BO75841 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.19
UPK1BO75841 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
UPK1BO75841 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.83□□□□□ -0.19
UPK1BO75841 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
UPK1BO75841 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
UPK1BO75841 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.83□□□□□ -0.19
UPK1BO75841 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
UPK1BO75841 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
UPK1BO75841 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
UPK1BO75841 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.83□□□□□ -0.19
UPK1BO75841 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UPK1BO75841 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.83□□□□□ -0.2
UPK1BO75841 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UPK1BO75841 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.83□□□□□ -0.2
UPK1BO75841 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
UPK1BO75841 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
UPK1BO75841 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UPK1BO75841 ABHD17AP1-201ENST00000358206 933 ntBASIC13.83□□□□□ -0.2
UPK1BO75841 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UPK1BO75841 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.83□□□□□ -0.2
UPK1BO75841 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.83□□□□□ -0.2
UPK1BO75841 CTNS-203ENST00000399306 803 ntTSL 3 BASIC13.83□□□□□ -0.2
UPK1BO75841 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC13.83□□□□□ -0.2
UPK1BO75841 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
UPK1BO75841 AL390955.1-201ENST00000428694 934 ntBASIC13.83□□□□□ -0.2
UPK1BO75841 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC13.83□□□□□ -0.2
UPK1BO75841 AC245100.5-201ENST00000452108 331 ntBASIC13.83□□□□□ -0.2
UPK1BO75841 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC13.83□□□□□ -0.2
UPK1BO75841 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC13.83□□□□□ -0.2
UPK1BO75841 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UPK1BO75841 PENK-204ENST00000518770 863 ntTSL 2 BASIC13.83□□□□□ -0.2
UPK1BO75841 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC13.83□□□□□ -0.2
UPK1BO75841 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC13.83□□□□□ -0.2
UPK1BO75841 ADM-205ENST00000528544 586 ntTSL 2 BASIC13.83□□□□□ -0.2
UPK1BO75841 AC026471.5-201ENST00000615068 467 ntBASIC13.83□□□□□ -0.2
UPK1BO75841 AC113410.3-201ENST00000623366 203 ntBASIC13.83□□□□□ -0.2
UPK1BO75841 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
UPK1BO75841 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UPK1BO75841 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
UPK1BO75841 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.83□□□□□ -0.2
UPK1BO75841 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.83□□□□□ -0.2
UPK1BO75841 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.83□□□□□ -0.2
UPK1BO75841 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
UPK1BO75841 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UPK1BO75841 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
UPK1BO75841 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.83□□□□□ -0.2
UPK1BO75841 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UPK1BO75841 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
UPK1BO75841 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
UPK1BO75841 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
UPK1BO75841 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UPK1BO75841 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UPK1BO75841 WASH3P-207ENST00000560956 1394 ntBASIC13.83□□□□□ -0.2
UPK1BO75841 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UPK1BO75841 FO538757.1-201ENST00000623083 1397 ntBASIC13.83□□□□□ -0.2
UPK1BO75841 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UPK1BO75841 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.83□□□□□ -0.2
UPK1BO75841 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
UPK1BO75841 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.82□□□□□ -0.2
UPK1BO75841 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UPK1BO75841 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
UPK1BO75841 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UPK1BO75841 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.82□□□□□ -0.2
UPK1BO75841 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
UPK1BO75841 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
UPK1BO75841 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
UPK1BO75841 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
UPK1BO75841 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.82□□□□□ -0.2
UPK1BO75841 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UPK1BO75841 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms