Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
GPC4O75487 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
GPC4O75487 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
GPC4O75487 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
GPC4O75487 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
GPC4O75487 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
GPC4O75487 FAM220BP-201ENST00000377689 816 ntBASIC15.98■□□□□ 0.15
GPC4O75487 MIR648-201ENST00000385046 94 ntBASIC15.98■□□□□ 0.15
GPC4O75487 MIR1233-2-201ENST00000408138 82 ntBASIC15.98■□□□□ 0.15
GPC4O75487 MIR1233-1-201ENST00000408722 82 ntBASIC15.98■□□□□ 0.15
GPC4O75487 FAM58DP-201ENST00000428076 619 ntBASIC15.98■□□□□ 0.15
GPC4O75487 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.98■□□□□ 0.15
GPC4O75487 SLC25A39P2-201ENST00000537614 270 ntBASIC15.98■□□□□ 0.15
GPC4O75487 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
GPC4O75487 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
GPC4O75487 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.98■□□□□ 0.15
GPC4O75487 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
GPC4O75487 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
GPC4O75487 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.98■□□□□ 0.15
GPC4O75487 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.98■□□□□ 0.15
GPC4O75487 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
GPC4O75487 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
GPC4O75487 AC022532.1-201ENST00000624563 1728 ntBASIC15.98■□□□□ 0.15
GPC4O75487 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
GPC4O75487 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
GPC4O75487 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
GPC4O75487 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.98■□□□□ 0.15
GPC4O75487 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
GPC4O75487 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
GPC4O75487 UXT-AS1-201ENST00000590504 1525 ntBASIC15.98■□□□□ 0.15
GPC4O75487 AC023824.1-201ENST00000562945 2975 ntBASIC15.98■□□□□ 0.15
GPC4O75487 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.98■□□□□ 0.15
GPC4O75487 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
GPC4O75487 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
GPC4O75487 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
GPC4O75487 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
GPC4O75487 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
GPC4O75487 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
GPC4O75487 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
GPC4O75487 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
GPC4O75487 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.97■□□□□ 0.15
GPC4O75487 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
GPC4O75487 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
GPC4O75487 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
GPC4O75487 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
GPC4O75487 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
GPC4O75487 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
GPC4O75487 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
GPC4O75487 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.97■□□□□ 0.15
GPC4O75487 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
GPC4O75487 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.97■□□□□ 0.15
GPC4O75487 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
GPC4O75487 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
GPC4O75487 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.97■□□□□ 0.15
GPC4O75487 AC005237.2-201ENST00000434368 219 ntBASIC15.97■□□□□ 0.15
GPC4O75487 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
GPC4O75487 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
GPC4O75487 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
GPC4O75487 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.97■□□□□ 0.15
GPC4O75487 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.97■□□□□ 0.15
GPC4O75487 MIR4321-201ENST00000592276 80 ntBASIC15.97■□□□□ 0.15
GPC4O75487 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
GPC4O75487 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.97■□□□□ 0.15
GPC4O75487 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
GPC4O75487 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
GPC4O75487 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
GPC4O75487 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
GPC4O75487 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
GPC4O75487 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
GPC4O75487 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
GPC4O75487 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
GPC4O75487 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.97■□□□□ 0.15
GPC4O75487 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
GPC4O75487 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
GPC4O75487 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
GPC4O75487 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
GPC4O75487 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.97■□□□□ 0.15
GPC4O75487 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
GPC4O75487 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
GPC4O75487 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GPC4O75487 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GPC4O75487 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GPC4O75487 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GPC4O75487 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.96■□□□□ 0.15
GPC4O75487 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
GPC4O75487 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.96■□□□□ 0.15
GPC4O75487 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
GPC4O75487 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
GPC4O75487 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
GPC4O75487 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GPC4O75487 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
GPC4O75487 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GPC4O75487 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
GPC4O75487 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
GPC4O75487 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GPC4O75487 CNN2P11-201ENST00000429351 262 ntBASIC15.96■□□□□ 0.15
GPC4O75487 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
GPC4O75487 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.96■□□□□ 0.15
GPC4O75487 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.96■□□□□ 0.15
GPC4O75487 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms