Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PAX4O43316 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
PAX4O43316 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
PAX4O43316 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
PAX4O43316 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC11.43□□□□□ -0.58
PAX4O43316 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
PAX4O43316 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
PAX4O43316 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC11.43□□□□□ -0.58
PAX4O43316 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC11.43□□□□□ -0.58
PAX4O43316 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC11.43□□□□□ -0.58
PAX4O43316 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC11.43□□□□□ -0.58
PAX4O43316 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC11.42□□□□□ -0.58
PAX4O43316 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC11.42□□□□□ -0.58
PAX4O43316 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
PAX4O43316 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
PAX4O43316 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
PAX4O43316 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PAX4O43316 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
PAX4O43316 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
PAX4O43316 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
PAX4O43316 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
PAX4O43316 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PAX4O43316 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
PAX4O43316 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PAX4O43316 CTBP1-AS2-206ENST00000581398 5652 ntBASIC11.42□□□□□ -0.58
PAX4O43316 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PAX4O43316 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PAX4O43316 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC11.42□□□□□ -0.58
PAX4O43316 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC11.42□□□□□ -0.58
PAX4O43316 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
PAX4O43316 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PAX4O43316 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
PAX4O43316 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC11.42□□□□□ -0.58
PAX4O43316 AC004461.1-201ENST00000412461 403 ntBASIC11.42□□□□□ -0.58
PAX4O43316 AC254562.1-201ENST00000417586 456 ntBASIC11.42□□□□□ -0.58
PAX4O43316 RPS8P6-201ENST00000426177 609 ntBASIC11.42□□□□□ -0.58
PAX4O43316 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC11.42□□□□□ -0.58
PAX4O43316 AC004967.1-201ENST00000453589 447 ntBASIC11.42□□□□□ -0.58
PAX4O43316 AC069335.1-201ENST00000489972 472 ntBASIC11.42□□□□□ -0.58
PAX4O43316 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
PAX4O43316 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC11.42□□□□□ -0.58
PAX4O43316 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC11.42□□□□□ -0.58
PAX4O43316 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC11.42□□□□□ -0.58
PAX4O43316 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC11.42□□□□□ -0.58
PAX4O43316 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC11.42□□□□□ -0.58
PAX4O43316 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC11.42□□□□□ -0.58
PAX4O43316 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC11.42□□□□□ -0.58
PAX4O43316 AL596442.2-201ENST00000610240 980 ntBASIC11.42□□□□□ -0.58
PAX4O43316 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
PAX4O43316 AC134684.3-201ENST00000641758 218 ntBASIC11.42□□□□□ -0.58
PAX4O43316 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
PAX4O43316 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
PAX4O43316 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC11.42□□□□□ -0.58
PAX4O43316 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
PAX4O43316 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PAX4O43316 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
PAX4O43316 GOLGA2P9-201ENST00000596977 1937 ntBASIC11.42□□□□□ -0.58
PAX4O43316 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
PAX4O43316 AC087386.2-201ENST00000623212 4637 ntBASIC11.42□□□□□ -0.58
PAX4O43316 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PAX4O43316 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PAX4O43316 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
PAX4O43316 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
PAX4O43316 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
PAX4O43316 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
PAX4O43316 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PAX4O43316 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
PAX4O43316 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
PAX4O43316 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC11.42□□□□□ -0.58
PAX4O43316 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC11.42□□□□□ -0.58
PAX4O43316 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
PAX4O43316 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
PAX4O43316 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC11.42□□□□□ -0.58
PAX4O43316 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
PAX4O43316 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
PAX4O43316 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
PAX4O43316 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
PAX4O43316 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PAX4O43316 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PAX4O43316 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
PAX4O43316 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
PAX4O43316 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
PAX4O43316 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
PAX4O43316 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PAX4O43316 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
PAX4O43316 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PAX4O43316 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
PAX4O43316 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC11.41□□□□□ -0.58
PAX4O43316 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC11.41□□□□□ -0.58
PAX4O43316 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
PAX4O43316 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC11.41□□□□□ -0.58
PAX4O43316 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PAX4O43316 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
PAX4O43316 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC11.41□□□□□ -0.58
PAX4O43316 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
PAX4O43316 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
PAX4O43316 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC11.41□□□□□ -0.58
PAX4O43316 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC11.41□□□□□ -0.58
PAX4O43316 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC11.41□□□□□ -0.58
PAX4O43316 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC11.41□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms