Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PHGDHO43175 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.83■□□□□ 0.13
PHGDHO43175 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
PHGDHO43175 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.83■□□□□ 0.13
PHGDHO43175 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.83■□□□□ 0.13
PHGDHO43175 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PHGDHO43175 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PHGDHO43175 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.83■□□□□ 0.13
PHGDHO43175 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.83■□□□□ 0.13
PHGDHO43175 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PHGDHO43175 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PHGDHO43175 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PHGDHO43175 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
PHGDHO43175 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PHGDHO43175 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
PHGDHO43175 RPS8P6-201ENST00000426177 609 ntBASIC15.83■□□□□ 0.12
PHGDHO43175 RN7SL589P-201ENST00000481268 310 ntBASIC15.83■□□□□ 0.12
PHGDHO43175 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.83■□□□□ 0.12
PHGDHO43175 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.83■□□□□ 0.12
PHGDHO43175 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.83■□□□□ 0.12
PHGDHO43175 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.83■□□□□ 0.12
PHGDHO43175 AP000842.3-202ENST00000569238 1080 ntBASIC15.83■□□□□ 0.12
PHGDHO43175 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
PHGDHO43175 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.83■□□□□ 0.12
PHGDHO43175 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PHGDHO43175 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PHGDHO43175 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PHGDHO43175 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.83■□□□□ 0.12
PHGDHO43175 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.83■□□□□ 0.12
PHGDHO43175 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PHGDHO43175 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PHGDHO43175 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.83■□□□□ 0.12
PHGDHO43175 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PHGDHO43175 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PHGDHO43175 AC091951.1-201ENST00000512854 2465 ntBASIC15.83■□□□□ 0.12
PHGDHO43175 AC006058.4-201ENST00000624016 1670 ntBASIC15.83■□□□□ 0.12
PHGDHO43175 C18orf15-201ENST00000623680 2534 ntBASIC15.83■□□□□ 0.12
PHGDHO43175 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PHGDHO43175 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PHGDHO43175 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHGDHO43175 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHGDHO43175 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHGDHO43175 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PHGDHO43175 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHGDHO43175 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PHGDHO43175 AC112693.3-201ENST00000624819 1983 ntBASIC15.82■□□□□ 0.12
PHGDHO43175 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHGDHO43175 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PHGDHO43175 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PHGDHO43175 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PHGDHO43175 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHGDHO43175 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHGDHO43175 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.82■□□□□ 0.12
PHGDHO43175 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PHGDHO43175 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PHGDHO43175 FAM220BP-201ENST00000377689 816 ntBASIC15.82■□□□□ 0.12
PHGDHO43175 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.82■□□□□ 0.12
PHGDHO43175 SPDYE11-202ENST00000450699 704 ntBASIC15.82■□□□□ 0.12
PHGDHO43175 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PHGDHO43175 AC079140.1-201ENST00000508039 487 ntBASIC15.82■□□□□ 0.12
PHGDHO43175 FAM86C2P-203ENST00000528684 1004 ntBASIC15.82■□□□□ 0.12
PHGDHO43175 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.82■□□□□ 0.12
PHGDHO43175 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.82■□□□□ 0.12
PHGDHO43175 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHGDHO43175 SPDYE9P-201ENST00000570642 692 ntBASIC15.82■□□□□ 0.12
PHGDHO43175 SPDYE10P-202ENST00000612005 668 ntBASIC15.82■□□□□ 0.12
PHGDHO43175 SPDYE8P-202ENST00000612377 668 ntBASIC15.82■□□□□ 0.12
PHGDHO43175 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHGDHO43175 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHGDHO43175 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHGDHO43175 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PHGDHO43175 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.82■□□□□ 0.12
PHGDHO43175 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHGDHO43175 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHGDHO43175 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHGDHO43175 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.82■□□□□ 0.12
PHGDHO43175 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHGDHO43175 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PHGDHO43175 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PHGDHO43175 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHGDHO43175 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PHGDHO43175 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PHGDHO43175 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.82■□□□□ 0.12
PHGDHO43175 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PHGDHO43175 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.82■□□□□ 0.12
PHGDHO43175 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHGDHO43175 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PHGDHO43175 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHGDHO43175 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHGDHO43175 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHGDHO43175 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHGDHO43175 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHGDHO43175 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
PHGDHO43175 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PHGDHO43175 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHGDHO43175 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.81■□□□□ 0.12
PHGDHO43175 AC004987.2-201ENST00000395959 1148 ntBASIC15.81■□□□□ 0.12
PHGDHO43175 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHGDHO43175 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.81■□□□□ 0.12
PHGDHO43175 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms