Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
FOXN3O00409 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXN3O00409 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.97■□□□□ 0.31
FOXN3O00409 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
FOXN3O00409 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
FOXN3O00409 AC103702.1-201ENST00000548801 2630 ntBASIC16.97■□□□□ 0.31
FOXN3O00409 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.97■□□□□ 0.31
FOXN3O00409 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
FOXN3O00409 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXN3O00409 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
FOXN3O00409 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXN3O00409 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
FOXN3O00409 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.97■□□□□ 0.31
FOXN3O00409 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
FOXN3O00409 SPDYE7P-202ENST00000420373 878 ntBASIC16.97■□□□□ 0.31
FOXN3O00409 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.97■□□□□ 0.31
FOXN3O00409 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.97■□□□□ 0.31
FOXN3O00409 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
FOXN3O00409 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
FOXN3O00409 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.97■□□□□ 0.31
FOXN3O00409 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
FOXN3O00409 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
FOXN3O00409 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
FOXN3O00409 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
FOXN3O00409 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.97■□□□□ 0.31
FOXN3O00409 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXN3O00409 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXN3O00409 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXN3O00409 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
FOXN3O00409 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXN3O00409 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXN3O00409 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
FOXN3O00409 C18orf15-201ENST00000623680 2534 ntBASIC16.97■□□□□ 0.31
FOXN3O00409 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
FOXN3O00409 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXN3O00409 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXN3O00409 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXN3O00409 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
FOXN3O00409 AC023157.3-201ENST00000619086 2088 ntBASIC16.97■□□□□ 0.31
FOXN3O00409 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
FOXN3O00409 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
FOXN3O00409 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
FOXN3O00409 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
FOXN3O00409 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
FOXN3O00409 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FOXN3O00409 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.96■□□□□ 0.31
FOXN3O00409 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
FOXN3O00409 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.96■□□□□ 0.31
FOXN3O00409 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.96■□□□□ 0.31
FOXN3O00409 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
FOXN3O00409 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.96■□□□□ 0.31
FOXN3O00409 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FOXN3O00409 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
FOXN3O00409 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
FOXN3O00409 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
FOXN3O00409 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
FOXN3O00409 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.96■□□□□ 0.31
FOXN3O00409 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.96■□□□□ 0.31
FOXN3O00409 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FOXN3O00409 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.96■□□□□ 0.31
FOXN3O00409 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.96■□□□□ 0.31
FOXN3O00409 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
FOXN3O00409 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.96■□□□□ 0.31
FOXN3O00409 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.96■□□□□ 0.31
FOXN3O00409 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FOXN3O00409 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FOXN3O00409 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
FOXN3O00409 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FOXN3O00409 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
FOXN3O00409 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
FOXN3O00409 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
FOXN3O00409 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
FOXN3O00409 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
FOXN3O00409 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
FOXN3O00409 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
FOXN3O00409 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FOXN3O00409 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FOXN3O00409 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FOXN3O00409 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FOXN3O00409 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FOXN3O00409 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
FOXN3O00409 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
FOXN3O00409 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FOXN3O00409 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FOXN3O00409 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
FOXN3O00409 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.95■□□□□ 0.3
FOXN3O00409 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FOXN3O00409 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FOXN3O00409 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FOXN3O00409 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FOXN3O00409 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FOXN3O00409 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.95■□□□□ 0.3
FOXN3O00409 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.95■□□□□ 0.3
FOXN3O00409 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.95■□□□□ 0.3
FOXN3O00409 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.95■□□□□ 0.3
FOXN3O00409 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.95■□□□□ 0.3
FOXN3O00409 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FOXN3O00409 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.95■□□□□ 0.3
FOXN3O00409 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
FOXN3O00409 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms