Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX39AO00148 AC008741.2-201ENST00000612792 3115 ntBASIC17.82■□□□□ 0.44
DDX39AO00148 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX39AO00148 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX39AO00148 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
DDX39AO00148 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX39AO00148 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX39AO00148 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
DDX39AO00148 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.82■□□□□ 0.44
DDX39AO00148 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX39AO00148 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DDX39AO00148 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.82■□□□□ 0.44
DDX39AO00148 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX39AO00148 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX39AO00148 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.82■□□□□ 0.44
DDX39AO00148 AC005225.4-201ENST00000557330 545 ntBASIC17.82■□□□□ 0.44
DDX39AO00148 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DDX39AO00148 AL596325.1-201ENST00000563991 1082 ntBASIC17.82■□□□□ 0.44
DDX39AO00148 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.82■□□□□ 0.44
DDX39AO00148 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DDX39AO00148 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.82■□□□□ 0.44
DDX39AO00148 AL035252.4-201ENST00000624174 288 ntBASIC17.82■□□□□ 0.44
DDX39AO00148 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.82■□□□□ 0.44
DDX39AO00148 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DDX39AO00148 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX39AO00148 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX39AO00148 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX39AO00148 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DDX39AO00148 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
DDX39AO00148 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX39AO00148 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.81■□□□□ 0.44
DDX39AO00148 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX39AO00148 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX39AO00148 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX39AO00148 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX39AO00148 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
DDX39AO00148 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX39AO00148 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX39AO00148 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DDX39AO00148 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.81■□□□□ 0.44
DDX39AO00148 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.81■□□□□ 0.44
DDX39AO00148 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DDX39AO00148 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
DDX39AO00148 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.81■□□□□ 0.44
DDX39AO00148 AC087499.6-201ENST00000411576 835 ntBASIC17.81■□□□□ 0.44
DDX39AO00148 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.81■□□□□ 0.44
DDX39AO00148 AC098850.1-201ENST00000419919 790 ntBASIC17.81■□□□□ 0.44
DDX39AO00148 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.81■□□□□ 0.44
DDX39AO00148 AC123567.1-201ENST00000548294 1261 ntBASIC17.81■□□□□ 0.44
DDX39AO00148 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.81■□□□□ 0.44
DDX39AO00148 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.81■□□□□ 0.44
DDX39AO00148 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.81■□□□□ 0.44
DDX39AO00148 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.81■□□□□ 0.44
DDX39AO00148 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.81■□□□□ 0.44
DDX39AO00148 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
DDX39AO00148 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX39AO00148 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.81■□□□□ 0.44
DDX39AO00148 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
DDX39AO00148 AC112504.1-201ENST00000623415 1841 ntBASIC17.81■□□□□ 0.44
DDX39AO00148 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX39AO00148 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.81■□□□□ 0.44
DDX39AO00148 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX39AO00148 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.81■□□□□ 0.44
DDX39AO00148 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX39AO00148 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX39AO00148 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
DDX39AO00148 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
DDX39AO00148 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX39AO00148 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX39AO00148 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX39AO00148 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX39AO00148 AL391005.1-201ENST00000623953 2435 ntBASIC17.8■□□□□ 0.44
DDX39AO00148 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX39AO00148 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX39AO00148 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX39AO00148 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX39AO00148 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.8■□□□□ 0.44
DDX39AO00148 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX39AO00148 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DDX39AO00148 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
DDX39AO00148 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DDX39AO00148 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX39AO00148 AC136604.1-201ENST00000418535 575 ntBASIC17.8■□□□□ 0.44
DDX39AO00148 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.8■□□□□ 0.44
DDX39AO00148 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
DDX39AO00148 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.8■□□□□ 0.44
DDX39AO00148 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DDX39AO00148 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.8■□□□□ 0.44
DDX39AO00148 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.8■□□□□ 0.44
DDX39AO00148 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
DDX39AO00148 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.8■□□□□ 0.44
DDX39AO00148 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.8■□□□□ 0.44
DDX39AO00148 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.8■□□□□ 0.44
DDX39AO00148 MIR8072-201ENST00000614241 80 ntBASIC17.8■□□□□ 0.44
DDX39AO00148 AL158212.4-201ENST00000624062 1286 ntBASIC17.8■□□□□ 0.44
DDX39AO00148 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.8■□□□□ 0.44
DDX39AO00148 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DDX39AO00148 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.8■□□□□ 0.44
DDX39AO00148 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DDX39AO00148 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms