Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC11.58□□□□□ -0.56
TRGV1A0A0A0MS02 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TRGV1A0A0A0MS02 AC243562.2-201ENST00000561247 970 ntBASIC11.58□□□□□ -0.56
TRGV1A0A0A0MS02 MIR4469-201ENST00000583919 79 ntBASIC11.58□□□□□ -0.56
TRGV1A0A0A0MS02 AC010327.4-202ENST00000591484 748 ntBASIC11.58□□□□□ -0.56
TRGV1A0A0A0MS02 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC11.58□□□□□ -0.56
TRGV1A0A0A0MS02 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
TRGV1A0A0A0MS02 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC11.58□□□□□ -0.56
TRGV1A0A0A0MS02 HOTTIP_1.1-201ENST00000620415 57 ntBASIC11.58□□□□□ -0.56
TRGV1A0A0A0MS02 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC11.58□□□□□ -0.56
TRGV1A0A0A0MS02 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
TRGV1A0A0A0MS02 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
TRGV1A0A0A0MS02 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TRGV1A0A0A0MS02 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TRGV1A0A0A0MS02 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TRGV1A0A0A0MS02 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
TRGV1A0A0A0MS02 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
TRGV1A0A0A0MS02 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
TRGV1A0A0A0MS02 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TRGV1A0A0A0MS02 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TRGV1A0A0A0MS02 MBP-202ENST00000355994 2772 ntTSL 5 BASIC11.58□□□□□ -0.56
TRGV1A0A0A0MS02 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC11.58□□□□□ -0.56
TRGV1A0A0A0MS02 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC11.58□□□□□ -0.56
TRGV1A0A0A0MS02 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TRGV1A0A0A0MS02 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TRGV1A0A0A0MS02 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC11.58□□□□□ -0.56
TRGV1A0A0A0MS02 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC11.58□□□□□ -0.56
TRGV1A0A0A0MS02 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TRGV1A0A0A0MS02 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC11.58□□□□□ -0.56
TRGV1A0A0A0MS02 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
TRGV1A0A0A0MS02 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
TRGV1A0A0A0MS02 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TRGV1A0A0A0MS02 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
TRGV1A0A0A0MS02 AC134407.2-201ENST00000625089 1978 ntBASIC11.58□□□□□ -0.56
TRGV1A0A0A0MS02 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 PTMS-202ENST00000389462 773 ntTSL 2 BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 PUS1-205ENST00000535067 838 ntTSL 3 BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 SLC25A39P2-201ENST00000537614 270 ntBASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 AC092865.5-201ENST00000545435 363 ntBASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 INO80E-210ENST00000567705 880 ntTSL 3 BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 AL162727.3-201ENST00000635661 2787 ntBASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TRGV1A0A0A0MS02 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC11.57□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms