Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DRB4X5D2U9 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 FOXO1B-201ENST00000504678 1527 ntBASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 STOM-202ENST00000347359 870 ntTSL 2 BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 FAM220BP-201ENST00000377689 816 ntBASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 AP000344.2-201ENST00000512987 629 ntBASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 TSFM-210ENST00000550559 897 ntTSL 5 BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 AL513210.1-201ENST00000629608 234 ntBASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 AC084121.4-201ENST00000641598 221 ntBASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 AF228730.8-201ENST00000642140 221 ntBASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
HLA-DRB4X5D2U9 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC12.02□□□□□ -0.48
HLA-DRB4X5D2U9 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
HLA-DRB4X5D2U9 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC12.02□□□□□ -0.48
HLA-DRB4X5D2U9 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
HLA-DRB4X5D2U9 AL603832.2-201ENST00000566195 2125 ntBASIC12.02□□□□□ -0.48
HLA-DRB4X5D2U9 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
HLA-DRB4X5D2U9 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
HLA-DRB4X5D2U9 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
HLA-DRB4X5D2U9 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC12.02□□□□□ -0.48
HLA-DRB4X5D2U9 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
HLA-DRB4X5D2U9 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
HLA-DRB4X5D2U9 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
HLA-DRB4X5D2U9 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
HLA-DRB4X5D2U9 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
HLA-DRB4X5D2U9 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC12.02□□□□□ -0.48
HLA-DRB4X5D2U9 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC12.02□□□□□ -0.48
HLA-DRB4X5D2U9 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC12.02□□□□□ -0.48
HLA-DRB4X5D2U9 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
HLA-DRB4X5D2U9 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
HLA-DRB4X5D2U9 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC12.02□□□□□ -0.48
HLA-DRB4X5D2U9 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HLA-DRB4X5D2U9 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HLA-DRB4X5D2U9 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC12.02□□□□□ -0.49
HLA-DRB4X5D2U9 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC12.02□□□□□ -0.49
HLA-DRB4X5D2U9 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
HLA-DRB4X5D2U9 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
HLA-DRB4X5D2U9 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
HLA-DRB4X5D2U9 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HLA-DRB4X5D2U9 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC12.02□□□□□ -0.49
HLA-DRB4X5D2U9 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
HLA-DRB4X5D2U9 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HLA-DRB4X5D2U9 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms